Gene : Glyma.11G100400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12550:SF49 - PROTEIN C06A5.3, ISOFORM B Genomic Order:  1004
Name:  ? Glyma.11G100400 Secondary Identifier:  ? PAC:30527894
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G100400 0.5kb upstream 0.5kb upstream 15581 true Chr11: 7605406-7620986 Glycine max
Glyma.11G100400 0.5kb upstream 0.5kb upstream 500 false Chr11: 7605406-7605905 Glycine max
Glyma.11G100400 0.5kb downstream 0.5kb downstream 15581 true Chr11: 7605906-7621486 Glycine max
Glyma.11G100400 0.5kb downstream 0.5kb downstream 500 false Chr11: 7620987-7621486 Glycine max
Glyma.11G100400 1.0kb upstream 1.0kb upstream 16081 true Chr11: 7604906-7620986 Glycine max
Glyma.11G100400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7604906-7605905 Glycine max
Glyma.11G100400 1.0kb downstream 1.0kb downstream 16081 true Chr11: 7605906-7621986 Glycine max
Glyma.11G100400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7620987-7621986 Glycine max
Glyma.11G100400 2.0kb upstream 2.0kb upstream 17081 true Chr11: 7603906-7620986 Glycine max
Glyma.11G100400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7603906-7605905 Glycine max
Glyma.11G100400 2.0kb downstream 2.0kb downstream 17081 true Chr11: 7605906-7622986 Glycine max
Glyma.11G100400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7620987-7622986 Glycine max
Glyma.11G100400 5.0kb upstream 5.0kb upstream 20081 true Chr11: 7600906-7620986 Glycine max
Glyma.11G100400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7600906-7605905 Glycine max
Glyma.11G100400 5.0kb downstream 5.0kb downstream 20081 true Chr11: 7605906-7625986 Glycine max
Glyma.11G100400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7620987-7625986 Glycine max
Glyma.11G100400 10.0kb upstream 10.0kb upstream 25081 true Chr11: 7595906-7620986 Glycine max
Glyma.11G100400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7595906-7605905 Glycine max
Glyma.11G100400 10.0kb downstream 10.0kb downstream 25081 true Chr11: 7605906-7630986 Glycine max
Glyma.11G100400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7620987-7630986 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307863 5265 Fabidae View MSA
124067114 5270 Rosid View MSA
123746905 5271 Pentapetalae View MSA
122789006 5272 Eudicot View MSA
122042271 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.71344 0.0 19.3049   High
cufflinks 3.136 0.0 11.0974    
cufflinks 5.40177 0.0 18.5808   High
cufflinks 4.9271 0.0 16.8518    
cufflinks 3.73639 0.0 12.9718    
cufflinks 2.41495 0.0 9.05517   Low
cufflinks 4.47422 0.0 15.215    
cufflinks 3.31081 0.0 11.777    
cufflinks 3.78438 0.0 13.3234    
cufflinks 0.45       Low
cufflinks 1.467       High
cufflinks 0.829        
cufflinks 0.494       Low
cufflinks 0.521       Low
cufflinks 1.35       High
cufflinks 0.791        
cufflinks 0.518       Low
cufflinks 0.782        
cufflinks 0.817        
cufflinks 0.944        
cufflinks 1.22       High
cufflinks 0.872        
cufflinks 0.631        
cufflinks 1.276       High
cufflinks 0.801        
cufflinks 0.828        

0 Strain