Gene : Glyma.11G102700 G. max Wm82.a2.v1
Defline:  (1 of 2) K13153 - U11/U12 small nuclear ribonucleoprotein 25 kDa protein Genomic Order:  1027
Name:  ? Glyma.11G102700 Secondary Identifier:  ? PAC:30531523
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G102700 0.5kb upstream 0.5kb upstream 4333 true Chr11: 7801327-7805659 Glycine max
Glyma.11G102700 0.5kb upstream 0.5kb upstream 500 false Chr11: 7805160-7805659 Glycine max
Glyma.11G102700 0.5kb downstream 0.5kb downstream 4333 true Chr11: 7800827-7805159 Glycine max
Glyma.11G102700 0.5kb downstream 0.5kb downstream 500 false Chr11: 7800827-7801326 Glycine max
Glyma.11G102700 1.0kb upstream 1.0kb upstream 4833 true Chr11: 7801327-7806159 Glycine max
Glyma.11G102700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7805160-7806159 Glycine max
Glyma.11G102700 1.0kb downstream 1.0kb downstream 4833 true Chr11: 7800327-7805159 Glycine max
Glyma.11G102700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7800327-7801326 Glycine max
Glyma.11G102700 2.0kb upstream 2.0kb upstream 5833 true Chr11: 7801327-7807159 Glycine max
Glyma.11G102700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7805160-7807159 Glycine max
Glyma.11G102700 2.0kb downstream 2.0kb downstream 5833 true Chr11: 7799327-7805159 Glycine max
Glyma.11G102700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7799327-7801326 Glycine max
Glyma.11G102700 5.0kb upstream 5.0kb upstream 8833 true Chr11: 7801327-7810159 Glycine max
Glyma.11G102700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7805160-7810159 Glycine max
Glyma.11G102700 5.0kb downstream 5.0kb downstream 8833 true Chr11: 7796327-7805159 Glycine max
Glyma.11G102700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7796327-7801326 Glycine max
Glyma.11G102700 10.0kb upstream 10.0kb upstream 13833 true Chr11: 7801327-7815159 Glycine max
Glyma.11G102700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7805160-7815159 Glycine max
Glyma.11G102700 10.0kb downstream 10.0kb downstream 13833 true Chr11: 7791327-7805159 Glycine max
Glyma.11G102700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7791327-7801326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310131 5265 Fabidae View MSA
124062835 5270 Rosid View MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.82285 0.0 34.6876    
cufflinks 6.85998 0.0 50.1334   High
cufflinks 6.23649 0.0 46.5733    
cufflinks 5.56845 0.0 47.2916    
cufflinks 4.51938 0.0 39.5149   Low
cufflinks 4.49095 0.0 40.5352   Low
cufflinks 6.57664 0.0 56.8001   High
cufflinks 5.21642 0.0 44.5608    
cufflinks 4.76754 0.0 46.386    
cufflinks 0.049     Low  
cufflinks 0.037     Low Low
cufflinks 0.083     Low  
cufflinks 0.051     Low  
cufflinks 0.077        
cufflinks 0.037     Low Low
cufflinks 0.101     Low  
cufflinks 0.047     Low  
cufflinks 0.12       High
cufflinks 0.076     Low  
cufflinks 0.125       High
cufflinks 0.036     Low Low
cufflinks 0.101        
cufflinks 0.108       High
cufflinks 0.048     Low  
cufflinks 0.119       High
cufflinks 0.032     Low Low

0 Strain