Gene : Glyma.11G094300 G. max Wm82.a2.v1
Defline:  (1 of 3) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  943
Name:  ? Glyma.11G094300 Secondary Identifier:  ? PAC:30530495
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G094300 0.5kb upstream 0.5kb upstream 16333 true Chr11: 7153148-7169480 Glycine max
Glyma.11G094300 0.5kb upstream 0.5kb upstream 500 false Chr11: 7168981-7169480 Glycine max
Glyma.11G094300 0.5kb downstream 0.5kb downstream 16333 true Chr11: 7152648-7168980 Glycine max
Glyma.11G094300 0.5kb downstream 0.5kb downstream 500 false Chr11: 7152648-7153147 Glycine max
Glyma.11G094300 1.0kb upstream 1.0kb upstream 16833 true Chr11: 7153148-7169980 Glycine max
Glyma.11G094300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7168981-7169980 Glycine max
Glyma.11G094300 1.0kb downstream 1.0kb downstream 16833 true Chr11: 7152148-7168980 Glycine max
Glyma.11G094300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7152148-7153147 Glycine max
Glyma.11G094300 2.0kb upstream 2.0kb upstream 17833 true Chr11: 7153148-7170980 Glycine max
Glyma.11G094300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7168981-7170980 Glycine max
Glyma.11G094300 2.0kb downstream 2.0kb downstream 17833 true Chr11: 7151148-7168980 Glycine max
Glyma.11G094300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7151148-7153147 Glycine max
Glyma.11G094300 5.0kb upstream 5.0kb upstream 20833 true Chr11: 7153148-7173980 Glycine max
Glyma.11G094300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7168981-7173980 Glycine max
Glyma.11G094300 5.0kb downstream 5.0kb downstream 20833 true Chr11: 7148148-7168980 Glycine max
Glyma.11G094300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7148148-7153147 Glycine max
Glyma.11G094300 10.0kb upstream 10.0kb upstream 25833 true Chr11: 7153148-7178980 Glycine max
Glyma.11G094300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7168981-7178980 Glycine max
Glyma.11G094300 10.0kb downstream 10.0kb downstream 25833 true Chr11: 7143148-7168980 Glycine max
Glyma.11G094300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7143148-7153147 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122307524 5265 Fabidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.3985 0.0 41.9997    
cufflinks 11.3054 0.0 30.3459   Low
cufflinks 12.6849 0.0 34.2443    
cufflinks 15.922 0.0 43.5611    
cufflinks 22.0661 0.0 62.2152 High High
cufflinks 11.3164 0.0 30.3801   Low
cufflinks 17.2398 0.0 47.3974    
cufflinks 14.9697 0.0 40.7864    
cufflinks 15.6575 0.0 42.7928    
cufflinks 3.792        
cufflinks 1.923       Low
cufflinks 4.621        
cufflinks 6.668       High
cufflinks 8.374     High High
cufflinks 3.172        
cufflinks 3.952        
cufflinks 3.314        
cufflinks 5.106        
cufflinks 4.483        
cufflinks 3.22        
cufflinks 3.094        
cufflinks 3.55        
cufflinks 3.699        
cufflinks 2.092       Low
cufflinks 3.582        
cufflinks 4.148        

0 Strain