Gene : Glyma.11G097500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34574:SF2 - EF-HAND CONTAINING PROTEIN-LIKE Genomic Order:  975
Name:  ? Glyma.11G097500 Secondary Identifier:  ? PAC:30530591
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G097500 0.5kb upstream 0.5kb upstream 5063 true Chr11: 7442423-7447485 Glycine max
Glyma.11G097500 0.5kb upstream 0.5kb upstream 500 false Chr11: 7442423-7442922 Glycine max
Glyma.11G097500 0.5kb downstream 0.5kb downstream 5063 true Chr11: 7442923-7447985 Glycine max
Glyma.11G097500 0.5kb downstream 0.5kb downstream 500 false Chr11: 7447486-7447985 Glycine max
Glyma.11G097500 1.0kb upstream 1.0kb upstream 5563 true Chr11: 7441923-7447485 Glycine max
Glyma.11G097500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7441923-7442922 Glycine max
Glyma.11G097500 1.0kb downstream 1.0kb downstream 5563 true Chr11: 7442923-7448485 Glycine max
Glyma.11G097500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7447486-7448485 Glycine max
Glyma.11G097500 2.0kb upstream 2.0kb upstream 6563 true Chr11: 7440923-7447485 Glycine max
Glyma.11G097500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7440923-7442922 Glycine max
Glyma.11G097500 2.0kb downstream 2.0kb downstream 6563 true Chr11: 7442923-7449485 Glycine max
Glyma.11G097500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7447486-7449485 Glycine max
Glyma.11G097500 5.0kb upstream 5.0kb upstream 9563 true Chr11: 7437923-7447485 Glycine max
Glyma.11G097500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7437923-7442922 Glycine max
Glyma.11G097500 5.0kb downstream 5.0kb downstream 9563 true Chr11: 7442923-7452485 Glycine max
Glyma.11G097500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7447486-7452485 Glycine max
Glyma.11G097500 10.0kb upstream 10.0kb upstream 14563 true Chr11: 7432923-7447485 Glycine max
Glyma.11G097500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7432923-7442922 Glycine max
Glyma.11G097500 10.0kb downstream 10.0kb downstream 14563 true Chr11: 7442923-7457485 Glycine max
Glyma.11G097500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7447486-7457485 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314356 5265 Fabidae View MSA
124062130 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.9227 0.0 144.298 High  
cufflinks 4.84917 0.0 21.465    
cufflinks 44.3545 0.0 253.375 High  
cufflinks 1.78972 0.0 6.7356   Low
cufflinks 18.0 0.0 86.9573    
cufflinks 47.3341 0.0 250.555 High High
cufflinks 4.15758 0.0 16.8657   Low
cufflinks 29.8157 0.0 106.027 High  
cufflinks 22.9743 0.0 79.8741 High  
cufflinks 0.912       Low
cufflinks 5.752     High  
cufflinks 4.566        
cufflinks 3.806        
cufflinks 1.488        
cufflinks 1.64        
cufflinks 2.013        
cufflinks 4.523        
cufflinks 0.838       Low
cufflinks 1.138       Low
cufflinks 2.076        
cufflinks 10.937     High High
cufflinks 4.088        
cufflinks 4.056        
cufflinks 13.58     High High
cufflinks 2.268        
cufflinks 6.264        

0 Strain