Gene : Glyma.11G099000 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  990
Name:  ? Glyma.11G099000 Secondary Identifier:  ? PAC:30528612
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G099000 0.5kb upstream 0.5kb upstream 3215 true Chr11: 7523808-7527022 Glycine max
Glyma.11G099000 0.5kb upstream 0.5kb upstream 500 false Chr11: 7523808-7524307 Glycine max
Glyma.11G099000 0.5kb downstream 0.5kb downstream 3215 true Chr11: 7524308-7527522 Glycine max
Glyma.11G099000 0.5kb downstream 0.5kb downstream 500 false Chr11: 7527023-7527522 Glycine max
Glyma.11G099000 1.0kb upstream 1.0kb upstream 3715 true Chr11: 7523308-7527022 Glycine max
Glyma.11G099000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7523308-7524307 Glycine max
Glyma.11G099000 1.0kb downstream 1.0kb downstream 3715 true Chr11: 7524308-7528022 Glycine max
Glyma.11G099000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7527023-7528022 Glycine max
Glyma.11G099000 2.0kb upstream 2.0kb upstream 4715 true Chr11: 7522308-7527022 Glycine max
Glyma.11G099000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7522308-7524307 Glycine max
Glyma.11G099000 2.0kb downstream 2.0kb downstream 4715 true Chr11: 7524308-7529022 Glycine max
Glyma.11G099000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7527023-7529022 Glycine max
Glyma.11G099000 5.0kb upstream 5.0kb upstream 7715 true Chr11: 7519308-7527022 Glycine max
Glyma.11G099000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7519308-7524307 Glycine max
Glyma.11G099000 5.0kb downstream 5.0kb downstream 7715 true Chr11: 7524308-7532022 Glycine max
Glyma.11G099000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7527023-7532022 Glycine max
Glyma.11G099000 10.0kb upstream 10.0kb upstream 12715 true Chr11: 7514308-7527022 Glycine max
Glyma.11G099000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7514308-7524307 Glycine max
Glyma.11G099000 10.0kb downstream 10.0kb downstream 12715 true Chr11: 7524308-7537022 Glycine max
Glyma.11G099000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7527023-7537022 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303918 5265 Fabidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4874 0.0 62.8616 High  
cufflinks 26.1563 0.0 69.8684 High High
cufflinks 13.0534 0.0 36.0905   Low
cufflinks 19.8766 0.0 53.4944 High  
cufflinks 28.4857 0.0 76.0001 High High
cufflinks 20.3158 0.0 54.5979    
cufflinks 18.0857 0.0 48.9072    
cufflinks 22.7879 0.0 61.0422 High  
cufflinks 17.5233 0.0 47.4683    
cufflinks 10.126     High  
cufflinks 4.283       Low
cufflinks 8.827     High  
cufflinks 14.558     High High
cufflinks 20.324     High High
cufflinks 3.086       Low
cufflinks 9.724     High  
cufflinks 9.608     High  
cufflinks 8.984     High  
cufflinks 11.646     High  
cufflinks 7.016     High  
cufflinks 5.002       Low
cufflinks 7.802     High  
cufflinks 13.433     High High
cufflinks 4.353       Low
cufflinks 8.316     High  
cufflinks 7.674     High  

0 Strain