Gene : Glyma.11G087200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13954 - IRE1-RELATED Genomic Order:  872
Name:  ? Glyma.11G087200 Secondary Identifier:  ? PAC:30529525
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G087200 0.5kb upstream 0.5kb upstream 6760 true Chr11: 6540562-6547321 Glycine max
Glyma.11G087200 0.5kb upstream 0.5kb upstream 500 false Chr11: 6546822-6547321 Glycine max
Glyma.11G087200 0.5kb downstream 0.5kb downstream 6760 true Chr11: 6540062-6546821 Glycine max
Glyma.11G087200 0.5kb downstream 0.5kb downstream 500 false Chr11: 6540062-6540561 Glycine max
Glyma.11G087200 1.0kb upstream 1.0kb upstream 7260 true Chr11: 6540562-6547821 Glycine max
Glyma.11G087200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6546822-6547821 Glycine max
Glyma.11G087200 1.0kb downstream 1.0kb downstream 7260 true Chr11: 6539562-6546821 Glycine max
Glyma.11G087200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6539562-6540561 Glycine max
Glyma.11G087200 2.0kb upstream 2.0kb upstream 8260 true Chr11: 6540562-6548821 Glycine max
Glyma.11G087200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6546822-6548821 Glycine max
Glyma.11G087200 2.0kb downstream 2.0kb downstream 8260 true Chr11: 6538562-6546821 Glycine max
Glyma.11G087200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6538562-6540561 Glycine max
Glyma.11G087200 5.0kb upstream 5.0kb upstream 11260 true Chr11: 6540562-6551821 Glycine max
Glyma.11G087200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6546822-6551821 Glycine max
Glyma.11G087200 5.0kb downstream 5.0kb downstream 11260 true Chr11: 6535562-6546821 Glycine max
Glyma.11G087200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6535562-6540561 Glycine max
Glyma.11G087200 10.0kb upstream 10.0kb upstream 16260 true Chr11: 6540562-6556821 Glycine max
Glyma.11G087200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6546822-6556821 Glycine max
Glyma.11G087200 10.0kb downstream 10.0kb downstream 16260 true Chr11: 6530562-6546821 Glycine max
Glyma.11G087200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6530562-6540561 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313681 5265 Fabidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.17086 0.0 11.6394    
cufflinks 3.0673 0.0 8.84324   Low
cufflinks 8.69553 0.0 23.2342   High
cufflinks 4.9611 0.0 13.6198    
cufflinks 5.44131 0.0 14.8679    
cufflinks 9.50661 0.0 25.3792   High
cufflinks 5.04885 0.0 13.886    
cufflinks 5.61257 0.0 15.2858    
cufflinks 5.97993 0.0 16.2249    
cufflinks 1.816       Low
cufflinks 2.917        
cufflinks 4.616       High
cufflinks 3.592        
cufflinks 3.097        
cufflinks 4.058       High
cufflinks 2.005        
cufflinks 1.815       Low
cufflinks 3.492        
cufflinks 2.161        
cufflinks 1.793       Low
cufflinks 3.3        
cufflinks 2.132        
cufflinks 1.521       Low
cufflinks 3.169        
cufflinks 1.791       Low
cufflinks 3.441        

0 Strain