Gene : Glyma.11G087500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31942:SF18 - MLO-LIKE PROTEIN 10-RELATED Genomic Order:  875
Name:  ? Glyma.11G087500 Secondary Identifier:  ? PAC:30528750
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G087500 0.5kb upstream 0.5kb upstream 6653 true Chr11: 6573705-6580357 Glycine max
Glyma.11G087500 0.5kb upstream 0.5kb upstream 500 false Chr11: 6573705-6574204 Glycine max
Glyma.11G087500 0.5kb downstream 0.5kb downstream 6653 true Chr11: 6574205-6580857 Glycine max
Glyma.11G087500 0.5kb downstream 0.5kb downstream 500 false Chr11: 6580358-6580857 Glycine max
Glyma.11G087500 1.0kb upstream 1.0kb upstream 7153 true Chr11: 6573205-6580357 Glycine max
Glyma.11G087500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6573205-6574204 Glycine max
Glyma.11G087500 1.0kb downstream 1.0kb downstream 7153 true Chr11: 6574205-6581357 Glycine max
Glyma.11G087500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6580358-6581357 Glycine max
Glyma.11G087500 2.0kb upstream 2.0kb upstream 8153 true Chr11: 6572205-6580357 Glycine max
Glyma.11G087500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6572205-6574204 Glycine max
Glyma.11G087500 2.0kb downstream 2.0kb downstream 8153 true Chr11: 6574205-6582357 Glycine max
Glyma.11G087500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6580358-6582357 Glycine max
Glyma.11G087500 5.0kb upstream 5.0kb upstream 11153 true Chr11: 6569205-6580357 Glycine max
Glyma.11G087500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6569205-6574204 Glycine max
Glyma.11G087500 5.0kb downstream 5.0kb downstream 11153 true Chr11: 6574205-6585357 Glycine max
Glyma.11G087500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6580358-6585357 Glycine max
Glyma.11G087500 10.0kb upstream 10.0kb upstream 16153 true Chr11: 6564205-6580357 Glycine max
Glyma.11G087500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6564205-6574204 Glycine max
Glyma.11G087500 10.0kb downstream 10.0kb downstream 16153 true Chr11: 6574205-6590357 Glycine max
Glyma.11G087500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6580358-6590357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297275 5265 Fabidae View MSA
124063446 5270 Rosid View MSA
123751261 5271 Pentapetalae View MSA
122792831 5272 Eudicot View MSA
122047859 5273 Angiosperm View MSA
121350481 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.9303 0.0 106.158 High High
cufflinks 5.13261 0.0 17.0297    
cufflinks 39.1813 0.0 154.843 High High
cufflinks 7.91984 0.0 28.2678    
cufflinks 2.41226 0.0 10.1493    
cufflinks 1.85657 0.0 6.38163    
cufflinks 0.97544 0.0 4.02253   Low
cufflinks 17.5022 0.0 60.9291    
cufflinks 3.95231 0.0 16.2634    
cufflinks 2.085        
cufflinks 2.106        
cufflinks 5.781       High
cufflinks 0.392       Low
cufflinks 0.13       Low
cufflinks 0.634        
cufflinks 1.178        
cufflinks 1.655        
cufflinks 2.747        
cufflinks 0.672        
cufflinks 3.016        
cufflinks 2.104        
cufflinks 2.791        
cufflinks 1.954        
cufflinks 1.703        
cufflinks 2.067        
cufflinks 2.363        

0 Strain