Gene : Glyma.11G087600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING Genomic Order:  876
Name:  ? Glyma.11G087600 Secondary Identifier:  ? PAC:30529894
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G087600 0.5kb upstream 0.5kb upstream 1918 true Chr11: 6587952-6589869 Glycine max
Glyma.11G087600 0.5kb upstream 0.5kb upstream 500 false Chr11: 6587952-6588451 Glycine max
Glyma.11G087600 0.5kb downstream 0.5kb downstream 1918 true Chr11: 6588452-6590369 Glycine max
Glyma.11G087600 0.5kb downstream 0.5kb downstream 500 false Chr11: 6589870-6590369 Glycine max
Glyma.11G087600 1.0kb upstream 1.0kb upstream 2418 true Chr11: 6587452-6589869 Glycine max
Glyma.11G087600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6587452-6588451 Glycine max
Glyma.11G087600 1.0kb downstream 1.0kb downstream 2418 true Chr11: 6588452-6590869 Glycine max
Glyma.11G087600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6589870-6590869 Glycine max
Glyma.11G087600 2.0kb upstream 2.0kb upstream 3418 true Chr11: 6586452-6589869 Glycine max
Glyma.11G087600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6586452-6588451 Glycine max
Glyma.11G087600 2.0kb downstream 2.0kb downstream 3418 true Chr11: 6588452-6591869 Glycine max
Glyma.11G087600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6589870-6591869 Glycine max
Glyma.11G087600 5.0kb upstream 5.0kb upstream 6418 true Chr11: 6583452-6589869 Glycine max
Glyma.11G087600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6583452-6588451 Glycine max
Glyma.11G087600 5.0kb downstream 5.0kb downstream 6418 true Chr11: 6588452-6594869 Glycine max
Glyma.11G087600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6589870-6594869 Glycine max
Glyma.11G087600 10.0kb upstream 10.0kb upstream 11418 true Chr11: 6578452-6589869 Glycine max
Glyma.11G087600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6578452-6588451 Glycine max
Glyma.11G087600 10.0kb downstream 10.0kb downstream 11418 true Chr11: 6588452-6599869 Glycine max
Glyma.11G087600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6589870-6599869 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301230 5265 Fabidae View MSA
124070863 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0619 0.0 38.2806   High
cufflinks 6.02565 0.0 18.0263    
cufflinks 13.9538 0.0 38.3277   High
cufflinks 5.6821 0.0 17.1376    
cufflinks 3.33459 0.0 10.6886    
cufflinks 0.857746 0.0 3.14005   Low
cufflinks 5.17354 0.0 15.6765    
cufflinks 9.53912 0.0 26.96    
cufflinks 4.23824 0.0 13.2477    
cufflinks 3.673        
cufflinks 5.841     High  
cufflinks 3.446        
cufflinks 0.454       Low
cufflinks 0.202       Low
cufflinks 2.995        
cufflinks 3.832        
cufflinks 1.531        
cufflinks 2.887        
cufflinks 2.336        
cufflinks 4.82        
cufflinks 9.337     High High
cufflinks 3.285        
cufflinks 1.96        
cufflinks 4.891        
cufflinks 2.708        
cufflinks 5.174        

0 Strain