Gene : Glyma.11G088200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22912//PTHR22912:SF183 - DISULFIDE OXIDOREDUCTASE Genomic Order:  882
Name:  ? Glyma.11G088200 Secondary Identifier:  ? PAC:30529572
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G088200 0.5kb upstream 0.5kb upstream 4941 true Chr11: 6658391-6663331 Glycine max
Glyma.11G088200 0.5kb upstream 0.5kb upstream 500 false Chr11: 6662832-6663331 Glycine max
Glyma.11G088200 0.5kb downstream 0.5kb downstream 4941 true Chr11: 6657891-6662831 Glycine max
Glyma.11G088200 0.5kb downstream 0.5kb downstream 500 false Chr11: 6657891-6658390 Glycine max
Glyma.11G088200 1.0kb upstream 1.0kb upstream 5441 true Chr11: 6658391-6663831 Glycine max
Glyma.11G088200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6662832-6663831 Glycine max
Glyma.11G088200 1.0kb downstream 1.0kb downstream 5441 true Chr11: 6657391-6662831 Glycine max
Glyma.11G088200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6657391-6658390 Glycine max
Glyma.11G088200 2.0kb upstream 2.0kb upstream 6441 true Chr11: 6658391-6664831 Glycine max
Glyma.11G088200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6662832-6664831 Glycine max
Glyma.11G088200 2.0kb downstream 2.0kb downstream 6441 true Chr11: 6656391-6662831 Glycine max
Glyma.11G088200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6656391-6658390 Glycine max
Glyma.11G088200 5.0kb upstream 5.0kb upstream 9441 true Chr11: 6658391-6667831 Glycine max
Glyma.11G088200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6662832-6667831 Glycine max
Glyma.11G088200 5.0kb downstream 5.0kb downstream 9441 true Chr11: 6653391-6662831 Glycine max
Glyma.11G088200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6653391-6658390 Glycine max
Glyma.11G088200 10.0kb upstream 10.0kb upstream 14441 true Chr11: 6658391-6672831 Glycine max
Glyma.11G088200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6662832-6672831 Glycine max
Glyma.11G088200 10.0kb downstream 10.0kb downstream 14441 true Chr11: 6648391-6662831 Glycine max
Glyma.11G088200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6648391-6658390 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307190 5265 Fabidae View MSA
124061396 5270 Rosid View MSA
123746891 5271 Pentapetalae View MSA
122793572 5272 Eudicot View MSA
122044945 5273 Angiosperm View MSA
121345859 5274 Embryophyte View MSA
123424818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9726 0.0 40.0365    
cufflinks 10.3501 0.0 28.1742    
cufflinks 17.859 0.0 47.6848    
cufflinks 13.1383 0.0 35.3179    
cufflinks 21.7042 0.0 58.0377 High High
cufflinks 19.537 0.0 52.1349    
cufflinks 6.11614 0.0 17.3307   Low
cufflinks 20.5005 0.0 54.7041    
cufflinks 13.047 0.0 35.0382    
cufflinks 3.645        
cufflinks 5.881     High  
cufflinks 4.136        
cufflinks 5.34        
cufflinks 6.202        
cufflinks 7.96     High High
cufflinks 3.162        
cufflinks 7.873     High High
cufflinks 2.899        
cufflinks 4.058        
cufflinks 1.953       Low
cufflinks 5.312        
cufflinks 2.748        
cufflinks 3.038        
cufflinks 7.568     High High
cufflinks 2.058       Low
cufflinks 6.477     High  

0 Strain