Gene : Glyma.11G088700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31669:SF54 - PROTEIN FAR1-RELATED SEQUENCE 5 Genomic Order:  887
Name:  ? Glyma.11G088700 Secondary Identifier:  ? PAC:30527807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G088700 0.5kb upstream 0.5kb upstream 5198 true Chr11: 6701128-6706325 Glycine max
Glyma.11G088700 0.5kb upstream 0.5kb upstream 500 false Chr11: 6701128-6701627 Glycine max
Glyma.11G088700 0.5kb downstream 0.5kb downstream 5198 true Chr11: 6701628-6706825 Glycine max
Glyma.11G088700 0.5kb downstream 0.5kb downstream 500 false Chr11: 6706326-6706825 Glycine max
Glyma.11G088700 1.0kb upstream 1.0kb upstream 5698 true Chr11: 6700628-6706325 Glycine max
Glyma.11G088700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6700628-6701627 Glycine max
Glyma.11G088700 1.0kb downstream 1.0kb downstream 5698 true Chr11: 6701628-6707325 Glycine max
Glyma.11G088700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6706326-6707325 Glycine max
Glyma.11G088700 2.0kb upstream 2.0kb upstream 6698 true Chr11: 6699628-6706325 Glycine max
Glyma.11G088700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6699628-6701627 Glycine max
Glyma.11G088700 2.0kb downstream 2.0kb downstream 6698 true Chr11: 6701628-6708325 Glycine max
Glyma.11G088700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6706326-6708325 Glycine max
Glyma.11G088700 5.0kb upstream 5.0kb upstream 9698 true Chr11: 6696628-6706325 Glycine max
Glyma.11G088700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6696628-6701627 Glycine max
Glyma.11G088700 5.0kb downstream 5.0kb downstream 9698 true Chr11: 6701628-6711325 Glycine max
Glyma.11G088700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6706326-6711325 Glycine max
Glyma.11G088700 10.0kb upstream 10.0kb upstream 14698 true Chr11: 6691628-6706325 Glycine max
Glyma.11G088700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6691628-6701627 Glycine max
Glyma.11G088700 10.0kb downstream 10.0kb downstream 14698 true Chr11: 6701628-6716325 Glycine max
Glyma.11G088700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6706326-6716325 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307055 5265 Fabidae View MSA
124070617 5270 Rosid View MSA
123627925 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.949482 0.0 3.1776   Low
cufflinks 2.83249 0.0 8.14377   High
cufflinks 3.68853 0.0 10.2817   High
cufflinks 1.83205 0.0 5.58143    
cufflinks 1.21573 0.0 3.94129    
cufflinks 1.29877 0.0 4.15864    
cufflinks 2.43737 0.0 7.17026    
cufflinks 1.49349 0.0 4.68454    
cufflinks 1.17896 0.0 3.82459    
cufflinks 1.071        
cufflinks 0.262        
cufflinks 2.36       High
cufflinks 1.338        
cufflinks 1.447        
cufflinks 0.223       Low
cufflinks 0.972        
cufflinks 0.241       Low
cufflinks 1.44        
cufflinks 2.486       High
cufflinks 0.907        
cufflinks 0.141       Low
cufflinks 0.94        
cufflinks 1.392        
cufflinks 0.171       Low
cufflinks 0.921        
cufflinks 0.201       Low

0 Strain