Gene : Glyma.11G090700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22990 - F-BOX ONLY PROTEIN Genomic Order:  907
Name:  ? Glyma.11G090700 Secondary Identifier:  ? PAC:30531396
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G090700 0.5kb upstream 0.5kb upstream 3597 true Chr11: 6862402-6865998 Glycine max
Glyma.11G090700 0.5kb upstream 0.5kb upstream 500 false Chr11: 6862402-6862901 Glycine max
Glyma.11G090700 0.5kb downstream 0.5kb downstream 3597 true Chr11: 6862902-6866498 Glycine max
Glyma.11G090700 0.5kb downstream 0.5kb downstream 500 false Chr11: 6865999-6866498 Glycine max
Glyma.11G090700 1.0kb upstream 1.0kb upstream 4097 true Chr11: 6861902-6865998 Glycine max
Glyma.11G090700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6861902-6862901 Glycine max
Glyma.11G090700 1.0kb downstream 1.0kb downstream 4097 true Chr11: 6862902-6866998 Glycine max
Glyma.11G090700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6865999-6866998 Glycine max
Glyma.11G090700 2.0kb upstream 2.0kb upstream 5097 true Chr11: 6860902-6865998 Glycine max
Glyma.11G090700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6860902-6862901 Glycine max
Glyma.11G090700 2.0kb downstream 2.0kb downstream 5097 true Chr11: 6862902-6867998 Glycine max
Glyma.11G090700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6865999-6867998 Glycine max
Glyma.11G090700 5.0kb upstream 5.0kb upstream 8097 true Chr11: 6857902-6865998 Glycine max
Glyma.11G090700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6857902-6862901 Glycine max
Glyma.11G090700 5.0kb downstream 5.0kb downstream 8097 true Chr11: 6862902-6870998 Glycine max
Glyma.11G090700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6865999-6870998 Glycine max
Glyma.11G090700 10.0kb upstream 10.0kb upstream 13097 true Chr11: 6852902-6865998 Glycine max
Glyma.11G090700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6852902-6862901 Glycine max
Glyma.11G090700 10.0kb downstream 10.0kb downstream 13097 true Chr11: 6862902-6875998 Glycine max
Glyma.11G090700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6865999-6875998 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041271 5273 Angiosperm View MSA
122307369 5265 Fabidae View MSA
124064461 5270 Rosid View MSA
123751585 5271 Pentapetalae View MSA
122789418 5272 Eudicot View MSA
121344604 5274 Embryophyte View MSA
123428680 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.65684 0.0 24.1838    
cufflinks 9.37803 0.0 25.9715    
cufflinks 10.2182 0.0 28.0532    
cufflinks 11.1236 0.0 30.3956   High
cufflinks 8.41902 0.0 23.5823    
cufflinks 7.74463 0.0 21.8627   Low
cufflinks 9.08711 0.0 25.2853    
cufflinks 11.4183 0.0 31.1282   High
cufflinks 8.30843 0.0 23.2713    
cufflinks 5.414        
cufflinks 5.93     High  
cufflinks 6.784        
cufflinks 5.136        
cufflinks 6.432        
cufflinks 3.416       Low
cufflinks 7.516     High  
cufflinks 3.029       Low
cufflinks 6.718        
cufflinks 7.412        
cufflinks 9.18     High High
cufflinks 5.345        
cufflinks 8.386     High High
cufflinks 7.115        
cufflinks 5.526        
cufflinks 7.937     High  
cufflinks 5.271        

0 Strain