Gene : Glyma.11G091200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15362:SF4 - CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE Genomic Order:  912
Name:  ? Glyma.11G091200 Secondary Identifier:  ? PAC:30528399
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  
Gmax PWY-7625 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G091200 0.5kb upstream 0.5kb upstream 4997 true Chr11: 6893503-6898499 Glycine max
Glyma.11G091200 0.5kb upstream 0.5kb upstream 500 false Chr11: 6898000-6898499 Glycine max
Glyma.11G091200 0.5kb downstream 0.5kb downstream 4997 true Chr11: 6893003-6897999 Glycine max
Glyma.11G091200 0.5kb downstream 0.5kb downstream 500 false Chr11: 6893003-6893502 Glycine max
Glyma.11G091200 1.0kb upstream 1.0kb upstream 5497 true Chr11: 6893503-6898999 Glycine max
Glyma.11G091200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6898000-6898999 Glycine max
Glyma.11G091200 1.0kb downstream 1.0kb downstream 5497 true Chr11: 6892503-6897999 Glycine max
Glyma.11G091200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6892503-6893502 Glycine max
Glyma.11G091200 2.0kb upstream 2.0kb upstream 6497 true Chr11: 6893503-6899999 Glycine max
Glyma.11G091200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6898000-6899999 Glycine max
Glyma.11G091200 2.0kb downstream 2.0kb downstream 6497 true Chr11: 6891503-6897999 Glycine max
Glyma.11G091200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6891503-6893502 Glycine max
Glyma.11G091200 5.0kb upstream 5.0kb upstream 9497 true Chr11: 6893503-6902999 Glycine max
Glyma.11G091200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6898000-6902999 Glycine max
Glyma.11G091200 5.0kb downstream 5.0kb downstream 9497 true Chr11: 6888503-6897999 Glycine max
Glyma.11G091200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6888503-6893502 Glycine max
Glyma.11G091200 10.0kb upstream 10.0kb upstream 14497 true Chr11: 6893503-6907999 Glycine max
Glyma.11G091200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6898000-6907999 Glycine max
Glyma.11G091200 10.0kb downstream 10.0kb downstream 14497 true Chr11: 6883503-6897999 Glycine max
Glyma.11G091200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6883503-6893502 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306572 5265 Fabidae View MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.369 0.0 36.8787    
cufflinks 12.0179 0.0 33.4056   Low
cufflinks 14.9296 0.0 40.733    
cufflinks 14.6498 0.0 40.0643    
cufflinks 21.3268 0.0 57.2475 High High
cufflinks 25.4452 0.0 67.9606 High High
cufflinks 16.5755 0.0 45.0988    
cufflinks 14.6008 0.0 39.951    
cufflinks 13.5325 0.0 37.23    
cufflinks 2.567        
cufflinks 1.756        
cufflinks 2.463        
cufflinks 4.231       High
cufflinks 5.321       High
cufflinks 1.173       Low
cufflinks 2.013        
cufflinks 2.119        
cufflinks 2.844        
cufflinks 2.292        
cufflinks 2.105        
cufflinks 2.044        
cufflinks 2.277        
cufflinks 2.152        
cufflinks 1.883        
cufflinks 2.041        
cufflinks 2.374        

0 Strain