Gene : Glyma.11G092000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31636:SF65 - SCARECROW-LIKE PROTEIN 4-RELATED Genomic Order:  920
Name:  ? Glyma.11G092000 Secondary Identifier:  ? PAC:30528337
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G092000 0.5kb upstream 0.5kb upstream 1991 true Chr11: 6972732-6974722 Glycine max
Glyma.11G092000 0.5kb upstream 0.5kb upstream 500 false Chr11: 6972732-6973231 Glycine max
Glyma.11G092000 0.5kb downstream 0.5kb downstream 1991 true Chr11: 6973232-6975222 Glycine max
Glyma.11G092000 0.5kb downstream 0.5kb downstream 500 false Chr11: 6974723-6975222 Glycine max
Glyma.11G092000 1.0kb upstream 1.0kb upstream 2491 true Chr11: 6972232-6974722 Glycine max
Glyma.11G092000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6972232-6973231 Glycine max
Glyma.11G092000 1.0kb downstream 1.0kb downstream 2491 true Chr11: 6973232-6975722 Glycine max
Glyma.11G092000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6974723-6975722 Glycine max
Glyma.11G092000 2.0kb upstream 2.0kb upstream 3491 true Chr11: 6971232-6974722 Glycine max
Glyma.11G092000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6971232-6973231 Glycine max
Glyma.11G092000 2.0kb downstream 2.0kb downstream 3491 true Chr11: 6973232-6976722 Glycine max
Glyma.11G092000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6974723-6976722 Glycine max
Glyma.11G092000 5.0kb upstream 5.0kb upstream 6491 true Chr11: 6968232-6974722 Glycine max
Glyma.11G092000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6968232-6973231 Glycine max
Glyma.11G092000 5.0kb downstream 5.0kb downstream 6491 true Chr11: 6973232-6979722 Glycine max
Glyma.11G092000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6974723-6979722 Glycine max
Glyma.11G092000 10.0kb upstream 10.0kb upstream 11491 true Chr11: 6963232-6974722 Glycine max
Glyma.11G092000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6963232-6973231 Glycine max
Glyma.11G092000 10.0kb downstream 10.0kb downstream 11491 true Chr11: 6973232-6984722 Glycine max
Glyma.11G092000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6974723-6984722 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239014 5265 Fabidae Singleton cluster - no MSA
123984324 5270 Rosid Singleton cluster - no MSA
123754363 5271 Pentapetalae View MSA
122775745 5272 Eudicot View MSA
122043818 5273 Angiosperm View MSA
121346051 5274 Embryophyte View MSA
123380313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0936 0.0 53.9937   High
cufflinks 13.4438 0.0 37.0724    
cufflinks 6.33868 0.0 19.2112    
cufflinks 14.1491 0.0 38.8323    
cufflinks 11.1879 0.0 31.0626    
cufflinks 4.57856 0.0 14.3034   Low
cufflinks 2.60347 0.0 8.76877   Low
cufflinks 19.133 0.0 51.5044   High
cufflinks 8.3785 0.0 24.1341    
cufflinks 4.749        
cufflinks 4.165        
cufflinks 5.434        
cufflinks 6.734        
cufflinks 8.585     High High
cufflinks 1.356       Low
cufflinks 5.815        
cufflinks 0.859       Low
cufflinks 4.314        
cufflinks 8.681     High High
cufflinks 4.728        
cufflinks 6.114     High  
cufflinks 5.395        
cufflinks 4.517        
cufflinks 5.007        
cufflinks 4.606        
cufflinks 2.376        

0 Strain