Gene : Glyma.11G133400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11649//PTHR11649:SF60 - MSS1/TRME-RELATED GTP-BINDING PROTEIN Genomic Order:  1334
Name:  ? Glyma.11G133400 Secondary Identifier:  ? PAC:30531251
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G133400 0.5kb upstream 0.5kb upstream 6946 true Chr11: 10197966-10204911 Glycine max
Glyma.11G133400 0.5kb upstream 0.5kb upstream 500 false Chr11: 10204412-10204911 Glycine max
Glyma.11G133400 0.5kb downstream 0.5kb downstream 6946 true Chr11: 10197466-10204411 Glycine max
Glyma.11G133400 0.5kb downstream 0.5kb downstream 500 false Chr11: 10197466-10197965 Glycine max
Glyma.11G133400 1.0kb upstream 1.0kb upstream 7446 true Chr11: 10197966-10205411 Glycine max
Glyma.11G133400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10204412-10205411 Glycine max
Glyma.11G133400 1.0kb downstream 1.0kb downstream 7446 true Chr11: 10196966-10204411 Glycine max
Glyma.11G133400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10196966-10197965 Glycine max
Glyma.11G133400 2.0kb upstream 2.0kb upstream 8446 true Chr11: 10197966-10206411 Glycine max
Glyma.11G133400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10204412-10206411 Glycine max
Glyma.11G133400 2.0kb downstream 2.0kb downstream 8446 true Chr11: 10195966-10204411 Glycine max
Glyma.11G133400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10195966-10197965 Glycine max
Glyma.11G133400 5.0kb upstream 5.0kb upstream 11446 true Chr11: 10197966-10209411 Glycine max
Glyma.11G133400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10204412-10209411 Glycine max
Glyma.11G133400 5.0kb downstream 5.0kb downstream 11446 true Chr11: 10192966-10204411 Glycine max
Glyma.11G133400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10192966-10197965 Glycine max
Glyma.11G133400 10.0kb upstream 10.0kb upstream 16446 true Chr11: 10197966-10214411 Glycine max
Glyma.11G133400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10204412-10214411 Glycine max
Glyma.11G133400 10.0kb downstream 10.0kb downstream 16446 true Chr11: 10187966-10204411 Glycine max
Glyma.11G133400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10187966-10197965 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303971 5265 Fabidae View MSA
124068964 5270 Rosid View MSA
123747725 5271 Pentapetalae View MSA
122788660 5272 Eudicot View MSA
122045813 5273 Angiosperm View MSA
121347341 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.210652 0.0 0.810053 Low  
cufflinks 0.228545 0.0 0.875808 Low  
cufflinks 0.137311 0.0 0.53673 Low  
cufflinks 0.060012 0.0 0.242168 Low Low
cufflinks 0.0958298 0.0 0.379932 Low  
cufflinks 0.113987 0.0 0.449119 Low  
cufflinks 0.549828 0.0 2.02346   High
cufflinks 0.0368317 0.0 0.152384 Low Low
cufflinks 0.248006 0.0 0.946703 Low  
cufflinks 0.032     Low  
cufflinks 0.015     Low Low
cufflinks 0.297        
cufflinks 0.102        
cufflinks 0.12        
cufflinks 0.023     Low Low
cufflinks 0.244        
cufflinks 0.033     Low  
cufflinks 0.391       High
cufflinks 0.176        
cufflinks 0.271        
cufflinks 0.02     Low Low
cufflinks 0.291        
cufflinks 0.46       High
cufflinks 0.027     Low  
cufflinks 0.267        
cufflinks 0.022     Low Low

0 Strain