Gene : Glyma.11G136000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23148 - SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN Genomic Order:  1360
Name:  ? Glyma.11G136000 Secondary Identifier:  ? PAC:30527861
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G136000 0.5kb upstream 0.5kb upstream 6893 true Chr11: 10337110-10344002 Glycine max
Glyma.11G136000 0.5kb upstream 0.5kb upstream 500 false Chr11: 10343503-10344002 Glycine max
Glyma.11G136000 0.5kb downstream 0.5kb downstream 6893 true Chr11: 10336610-10343502 Glycine max
Glyma.11G136000 0.5kb downstream 0.5kb downstream 500 false Chr11: 10336610-10337109 Glycine max
Glyma.11G136000 1.0kb upstream 1.0kb upstream 7393 true Chr11: 10337110-10344502 Glycine max
Glyma.11G136000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10343503-10344502 Glycine max
Glyma.11G136000 1.0kb downstream 1.0kb downstream 7393 true Chr11: 10336110-10343502 Glycine max
Glyma.11G136000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10336110-10337109 Glycine max
Glyma.11G136000 2.0kb upstream 2.0kb upstream 8393 true Chr11: 10337110-10345502 Glycine max
Glyma.11G136000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10343503-10345502 Glycine max
Glyma.11G136000 2.0kb downstream 2.0kb downstream 8393 true Chr11: 10335110-10343502 Glycine max
Glyma.11G136000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10335110-10337109 Glycine max
Glyma.11G136000 5.0kb upstream 5.0kb upstream 11393 true Chr11: 10337110-10348502 Glycine max
Glyma.11G136000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10343503-10348502 Glycine max
Glyma.11G136000 5.0kb downstream 5.0kb downstream 11393 true Chr11: 10332110-10343502 Glycine max
Glyma.11G136000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10332110-10337109 Glycine max
Glyma.11G136000 10.0kb upstream 10.0kb upstream 16393 true Chr11: 10337110-10353502 Glycine max
Glyma.11G136000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10343503-10353502 Glycine max
Glyma.11G136000 10.0kb downstream 10.0kb downstream 16393 true Chr11: 10327110-10343502 Glycine max
Glyma.11G136000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10327110-10337109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299188 5265 Fabidae View MSA
124062879 5270 Rosid View MSA
123744487 5271 Pentapetalae View MSA
122788944 5272 Eudicot View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7399 0.0 34.3712    
cufflinks 13.9848 0.0 37.9247    
cufflinks 12.7185 0.0 34.3457    
cufflinks 13.6724 0.0 37.0536    
cufflinks 12.4476 0.0 33.5446    
cufflinks 7.5871 0.0 20.2462   Low
cufflinks 16.6133 0.0 45.5091   High
cufflinks 9.4167 0.0 25.1613   Low
cufflinks 11.7829 0.0 31.6765    
cufflinks 5.935        
cufflinks 5.238       Low
cufflinks 10.578     High  
cufflinks 8.054     High  
cufflinks 10.81     High  
cufflinks 11.574     High  
cufflinks 11.495     High  
cufflinks 3.465       Low
cufflinks 11.513     High  
cufflinks 10.281     High  
cufflinks 13.31     High High
cufflinks 5.822     High  
cufflinks 12.114     High  
cufflinks 9.644     High  
cufflinks 4.847       Low
cufflinks 13.159     High High
cufflinks 4.847       Low

0 Strain