Gene : Glyma.11G137200 G. max Wm82.a2.v1
Defline:  (1 of 72) PF00564 - PB1 domain (PB1) Genomic Order:  1372
Name:  ? Glyma.11G137200 Secondary Identifier:  ? PAC:30530753
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G137200 0.5kb upstream 0.5kb upstream 1001 true Chr11: 10436889-10437889 Glycine max
Glyma.11G137200 0.5kb upstream 0.5kb upstream 500 false Chr11: 10437390-10437889 Glycine max
Glyma.11G137200 0.5kb downstream 0.5kb downstream 1001 true Chr11: 10436389-10437389 Glycine max
Glyma.11G137200 0.5kb downstream 0.5kb downstream 500 false Chr11: 10436389-10436888 Glycine max
Glyma.11G137200 1.0kb upstream 1.0kb upstream 1501 true Chr11: 10436889-10438389 Glycine max
Glyma.11G137200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10437390-10438389 Glycine max
Glyma.11G137200 1.0kb downstream 1.0kb downstream 1501 true Chr11: 10435889-10437389 Glycine max
Glyma.11G137200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10435889-10436888 Glycine max
Glyma.11G137200 2.0kb upstream 2.0kb upstream 2501 true Chr11: 10436889-10439389 Glycine max
Glyma.11G137200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10437390-10439389 Glycine max
Glyma.11G137200 2.0kb downstream 2.0kb downstream 2501 true Chr11: 10434889-10437389 Glycine max
Glyma.11G137200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10434889-10436888 Glycine max
Glyma.11G137200 5.0kb upstream 5.0kb upstream 5501 true Chr11: 10436889-10442389 Glycine max
Glyma.11G137200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10437390-10442389 Glycine max
Glyma.11G137200 5.0kb downstream 5.0kb downstream 5501 true Chr11: 10431889-10437389 Glycine max
Glyma.11G137200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10431889-10436888 Glycine max
Glyma.11G137200 10.0kb upstream 10.0kb upstream 10501 true Chr11: 10436889-10447389 Glycine max
Glyma.11G137200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10437390-10447389 Glycine max
Glyma.11G137200 10.0kb downstream 10.0kb downstream 10501 true Chr11: 10426889-10437389 Glycine max
Glyma.11G137200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10426889-10436888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246691 5265 Fabidae Singleton cluster - no MSA
123990607 5270 Rosid Singleton cluster - no MSA
123565621 5271 Pentapetalae Singleton cluster - no MSA
122600385 5272 Eudicot Singleton cluster - no MSA
122050894 5273 Angiosperm View MSA
121312193 5274 Embryophyte View MSA
123349392 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.18987 0.0 22.0757   High
cufflinks 5.14625 0.0 18.5532    
cufflinks 5.74927 0.0 20.7204    
cufflinks 4.58244 0.0 16.6652    
cufflinks 4.14653 0.0 15.1309    
cufflinks 3.70359 0.0 13.6415   Low
cufflinks 4.85066 0.0 17.5385    
cufflinks 6.54202 0.0 23.1586   High
cufflinks 4.1167 0.0 15.0365    
cufflinks 1.712        
cufflinks 2.254        
cufflinks 1.339        
cufflinks 1.943        
cufflinks 0.812       Low
cufflinks 2.009        
cufflinks 0.709       Low
cufflinks 5.126       High
cufflinks 1.432        
cufflinks 1.692        
cufflinks 0.735       Low
cufflinks 2.878       High
cufflinks 1.126        
cufflinks 1.417        
cufflinks 2.034        
cufflinks 0.908       Low
cufflinks 3.673       High

0 Strain