Gene : Glyma.11G137300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN Genomic Order:  1373
Name:  ? Glyma.11G137300 Secondary Identifier:  ? PAC:30531137
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G137300 0.5kb upstream 0.5kb upstream 2480 true Chr11: 10440172-10442651 Glycine max
Glyma.11G137300 0.5kb upstream 0.5kb upstream 500 false Chr11: 10440172-10440671 Glycine max
Glyma.11G137300 0.5kb downstream 0.5kb downstream 2480 true Chr11: 10440672-10443151 Glycine max
Glyma.11G137300 0.5kb downstream 0.5kb downstream 500 false Chr11: 10442652-10443151 Glycine max
Glyma.11G137300 1.0kb upstream 1.0kb upstream 2980 true Chr11: 10439672-10442651 Glycine max
Glyma.11G137300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10439672-10440671 Glycine max
Glyma.11G137300 1.0kb downstream 1.0kb downstream 2980 true Chr11: 10440672-10443651 Glycine max
Glyma.11G137300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10442652-10443651 Glycine max
Glyma.11G137300 2.0kb upstream 2.0kb upstream 3980 true Chr11: 10438672-10442651 Glycine max
Glyma.11G137300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10438672-10440671 Glycine max
Glyma.11G137300 2.0kb downstream 2.0kb downstream 3980 true Chr11: 10440672-10444651 Glycine max
Glyma.11G137300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10442652-10444651 Glycine max
Glyma.11G137300 5.0kb upstream 5.0kb upstream 6980 true Chr11: 10435672-10442651 Glycine max
Glyma.11G137300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10435672-10440671 Glycine max
Glyma.11G137300 5.0kb downstream 5.0kb downstream 6980 true Chr11: 10440672-10447651 Glycine max
Glyma.11G137300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10442652-10447651 Glycine max
Glyma.11G137300 10.0kb upstream 10.0kb upstream 11980 true Chr11: 10430672-10442651 Glycine max
Glyma.11G137300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10430672-10440671 Glycine max
Glyma.11G137300 10.0kb downstream 10.0kb downstream 11980 true Chr11: 10440672-10452651 Glycine max
Glyma.11G137300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10442652-10452651 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312857 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.8392 0.0 78.113 High High
cufflinks 1.8863 0.0 6.22554   Low
cufflinks 6.16291 0.0 17.4379    
cufflinks 2.67835 0.0 8.42509    
cufflinks 8.81817 0.0 23.9677    
cufflinks 10.541 0.0 28.4216    
cufflinks 1.96204 0.0 6.41055   Low
cufflinks 4.90648 0.0 14.195    
cufflinks 4.59242 0.0 13.3447    
cufflinks 26.348     High  
cufflinks 51.933     High  
cufflinks 28.501     High  
cufflinks 8.572     High  
cufflinks 3.104       Low
cufflinks 50.215     High  
cufflinks 34.516     High  
cufflinks 117.914     High High
cufflinks 32.32     High  
cufflinks 2.812       Low
cufflinks 14.828     High  
cufflinks 30.259     High  
cufflinks 14.759     High  
cufflinks 8.345     High  
cufflinks 44.635     High  
cufflinks 3.547       Low
cufflinks 35.216     High  

0 Strain