Gene : Glyma.11G137500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11709//PTHR11709:SF78 - MULTI-COPPER OXIDASE Genomic Order:  1375
Name:  ? Glyma.11G137500 Secondary Identifier:  ? PAC:30528728
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G137500 0.5kb upstream 0.5kb upstream 5142 true Chr11: 10456242-10461383 Glycine max
Glyma.11G137500 0.5kb upstream 0.5kb upstream 500 false Chr11: 10456242-10456741 Glycine max
Glyma.11G137500 0.5kb downstream 0.5kb downstream 5142 true Chr11: 10456742-10461883 Glycine max
Glyma.11G137500 0.5kb downstream 0.5kb downstream 500 false Chr11: 10461384-10461883 Glycine max
Glyma.11G137500 1.0kb upstream 1.0kb upstream 5642 true Chr11: 10455742-10461383 Glycine max
Glyma.11G137500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10455742-10456741 Glycine max
Glyma.11G137500 1.0kb downstream 1.0kb downstream 5642 true Chr11: 10456742-10462383 Glycine max
Glyma.11G137500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10461384-10462383 Glycine max
Glyma.11G137500 2.0kb upstream 2.0kb upstream 6642 true Chr11: 10454742-10461383 Glycine max
Glyma.11G137500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10454742-10456741 Glycine max
Glyma.11G137500 2.0kb downstream 2.0kb downstream 6642 true Chr11: 10456742-10463383 Glycine max
Glyma.11G137500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10461384-10463383 Glycine max
Glyma.11G137500 5.0kb upstream 5.0kb upstream 9642 true Chr11: 10451742-10461383 Glycine max
Glyma.11G137500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10451742-10456741 Glycine max
Glyma.11G137500 5.0kb downstream 5.0kb downstream 9642 true Chr11: 10456742-10466383 Glycine max
Glyma.11G137500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10461384-10466383 Glycine max
Glyma.11G137500 10.0kb upstream 10.0kb upstream 14642 true Chr11: 10446742-10461383 Glycine max
Glyma.11G137500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10446742-10456741 Glycine max
Glyma.11G137500 10.0kb downstream 10.0kb downstream 14642 true Chr11: 10456742-10471383 Glycine max
Glyma.11G137500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10461384-10471383 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300884 5265 Fabidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.155978 0.0 0.603287 Low  
cufflinks 0.0706251 0.0 0.28142 Low  
cufflinks 2.35643 0.0 7.39134    
cufflinks 219.151 0.0 865.17 High High
cufflinks 0.18383 0.0 0.705591 Low  
cufflinks 0.0461069 0.0 0.186842 Low  
cufflinks 0.00961438 0.0 0.0437604 Low Low
cufflinks 0.307319 0.0 1.15174    
cufflinks 0.39179 0.0 1.45217    
cufflinks 0.118        
cufflinks 0.059        
cufflinks 0.463       High
cufflinks 0.252        
cufflinks 0.048     Low  
cufflinks 0.04     Low  
cufflinks 0.171        
cufflinks 0.535       High
cufflinks 0.104     Low  
cufflinks 0.009     Low Low
cufflinks 0.275        
cufflinks 0.121        
cufflinks 0.123        
cufflinks 0.015     Low Low
cufflinks 0.154        
cufflinks 0.148        
cufflinks 0.622       High

0 Strain