Gene : Glyma.11G138400 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  1384
Name:  ? Glyma.11G138400 Secondary Identifier:  ? PAC:30531103
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G138400 0.5kb upstream 0.5kb upstream 4000 true Chr11: 10532178-10536177 Glycine max
Glyma.11G138400 0.5kb upstream 0.5kb upstream 500 false Chr11: 10535678-10536177 Glycine max
Glyma.11G138400 0.5kb downstream 0.5kb downstream 4000 true Chr11: 10531678-10535677 Glycine max
Glyma.11G138400 0.5kb downstream 0.5kb downstream 500 false Chr11: 10531678-10532177 Glycine max
Glyma.11G138400 1.0kb upstream 1.0kb upstream 4500 true Chr11: 10532178-10536677 Glycine max
Glyma.11G138400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10535678-10536677 Glycine max
Glyma.11G138400 1.0kb downstream 1.0kb downstream 4500 true Chr11: 10531178-10535677 Glycine max
Glyma.11G138400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10531178-10532177 Glycine max
Glyma.11G138400 2.0kb upstream 2.0kb upstream 5500 true Chr11: 10532178-10537677 Glycine max
Glyma.11G138400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10535678-10537677 Glycine max
Glyma.11G138400 2.0kb downstream 2.0kb downstream 5500 true Chr11: 10530178-10535677 Glycine max
Glyma.11G138400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10530178-10532177 Glycine max
Glyma.11G138400 5.0kb upstream 5.0kb upstream 8500 true Chr11: 10532178-10540677 Glycine max
Glyma.11G138400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10535678-10540677 Glycine max
Glyma.11G138400 5.0kb downstream 5.0kb downstream 8500 true Chr11: 10527178-10535677 Glycine max
Glyma.11G138400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10527178-10532177 Glycine max
Glyma.11G138400 10.0kb upstream 10.0kb upstream 13500 true Chr11: 10532178-10545677 Glycine max
Glyma.11G138400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10535678-10545677 Glycine max
Glyma.11G138400 10.0kb downstream 10.0kb downstream 13500 true Chr11: 10522178-10535677 Glycine max
Glyma.11G138400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10522178-10532177 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296556 5265 Fabidae View MSA
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.64143 0.0 17.9004   High
cufflinks 0.925148 0.0 5.92112   Low
cufflinks 1.34855 0.0 8.03096    
cufflinks 1.88584 0.0 7.88315    
cufflinks 2.25095 0.0 10.6484    
cufflinks 1.5574 0.0 8.23315    
cufflinks 1.8419 0.0 7.83061    
cufflinks 1.60615 0.0 7.12469    
cufflinks 1.86818 0.0 7.83246    
cufflinks 0.621        
cufflinks 0.603        
cufflinks 0.664        
cufflinks 0.616        
cufflinks 0.753       High
cufflinks 0.466        
cufflinks 0.389       Low
cufflinks 0.639        
cufflinks 0.563        
cufflinks 0.662        
cufflinks 0.512        
cufflinks 0.377       Low
cufflinks 0.566        
cufflinks 0.611        
cufflinks 0.776       High
cufflinks 0.402       Low
cufflinks 0.43       Low

0 Strain