Gene : Glyma.11G123900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16007//PTHR16007:SF14 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  1239
Name:  ? Glyma.11G123900 Secondary Identifier:  ? PAC:30529901
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G123900 0.5kb upstream 0.5kb upstream 2093 true Chr11: 9420425-9422517 Glycine max
Glyma.11G123900 0.5kb upstream 0.5kb upstream 500 false Chr11: 9420425-9420924 Glycine max
Glyma.11G123900 0.5kb downstream 0.5kb downstream 2093 true Chr11: 9420925-9423017 Glycine max
Glyma.11G123900 0.5kb downstream 0.5kb downstream 500 false Chr11: 9422518-9423017 Glycine max
Glyma.11G123900 1.0kb upstream 1.0kb upstream 2593 true Chr11: 9419925-9422517 Glycine max
Glyma.11G123900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9419925-9420924 Glycine max
Glyma.11G123900 1.0kb downstream 1.0kb downstream 2593 true Chr11: 9420925-9423517 Glycine max
Glyma.11G123900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9422518-9423517 Glycine max
Glyma.11G123900 2.0kb upstream 2.0kb upstream 3593 true Chr11: 9418925-9422517 Glycine max
Glyma.11G123900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9418925-9420924 Glycine max
Glyma.11G123900 2.0kb downstream 2.0kb downstream 3593 true Chr11: 9420925-9424517 Glycine max
Glyma.11G123900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9422518-9424517 Glycine max
Glyma.11G123900 5.0kb upstream 5.0kb upstream 6593 true Chr11: 9415925-9422517 Glycine max
Glyma.11G123900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9415925-9420924 Glycine max
Glyma.11G123900 5.0kb downstream 5.0kb downstream 6593 true Chr11: 9420925-9427517 Glycine max
Glyma.11G123900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9422518-9427517 Glycine max
Glyma.11G123900 10.0kb upstream 10.0kb upstream 11593 true Chr11: 9410925-9422517 Glycine max
Glyma.11G123900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9410925-9420924 Glycine max
Glyma.11G123900 10.0kb downstream 10.0kb downstream 11593 true Chr11: 9420925-9432517 Glycine max
Glyma.11G123900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9422518-9432517 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029799 5273 Angiosperm View MSA
122312915 5265 Fabidae View MSA
124062949 5270 Rosid View MSA
123736459 5271 Pentapetalae View MSA
122791594 5272 Eudicot View MSA
121299075 5274 Embryophyte View MSA
123336998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.5194 0.0 65.429 High  
cufflinks 4.28825 0.0 13.3095    
cufflinks 130.007 0.0 402.863 High High
cufflinks 11.7802 0.0 32.3771    
cufflinks 12.4155 0.0 34.0678    
cufflinks 0.714421 0.0 2.63926   Low
cufflinks 47.5262 0.0 129.19 High  
cufflinks 38.6734 0.0 104.123 High  
cufflinks 22.5429 0.0 60.1859 High  
cufflinks 5.488        
cufflinks 17.59     High  
cufflinks 45.466     High High
cufflinks 5.08        
cufflinks 0.103       Low
cufflinks 21.984     High  
cufflinks 6.276        
cufflinks 10.005     High  
cufflinks 6.67        
cufflinks 2.565        
cufflinks 9.394     High  
cufflinks 26.373     High  
cufflinks 9.537     High  
cufflinks 3.891        
cufflinks 34.113     High High
cufflinks 10.459     High  
cufflinks 14.976     High  

0 Strain