Gene : Glyma.11G125000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Genomic Order:  1250
Name:  ? Glyma.11G125000 Secondary Identifier:  ? PAC:30528137
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G125000 0.5kb upstream 0.5kb upstream 6585 true Chr11: 9491102-9497686 Glycine max
Glyma.11G125000 0.5kb upstream 0.5kb upstream 500 false Chr11: 9497187-9497686 Glycine max
Glyma.11G125000 0.5kb downstream 0.5kb downstream 6585 true Chr11: 9490602-9497186 Glycine max
Glyma.11G125000 0.5kb downstream 0.5kb downstream 500 false Chr11: 9490602-9491101 Glycine max
Glyma.11G125000 1.0kb upstream 1.0kb upstream 7085 true Chr11: 9491102-9498186 Glycine max
Glyma.11G125000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9497187-9498186 Glycine max
Glyma.11G125000 1.0kb downstream 1.0kb downstream 7085 true Chr11: 9490102-9497186 Glycine max
Glyma.11G125000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9490102-9491101 Glycine max
Glyma.11G125000 2.0kb upstream 2.0kb upstream 8085 true Chr11: 9491102-9499186 Glycine max
Glyma.11G125000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9497187-9499186 Glycine max
Glyma.11G125000 2.0kb downstream 2.0kb downstream 8085 true Chr11: 9489102-9497186 Glycine max
Glyma.11G125000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9489102-9491101 Glycine max
Glyma.11G125000 5.0kb upstream 5.0kb upstream 11085 true Chr11: 9491102-9502186 Glycine max
Glyma.11G125000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9497187-9502186 Glycine max
Glyma.11G125000 5.0kb downstream 5.0kb downstream 11085 true Chr11: 9486102-9497186 Glycine max
Glyma.11G125000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9486102-9491101 Glycine max
Glyma.11G125000 10.0kb upstream 10.0kb upstream 16085 true Chr11: 9491102-9507186 Glycine max
Glyma.11G125000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9497187-9507186 Glycine max
Glyma.11G125000 10.0kb downstream 10.0kb downstream 16085 true Chr11: 9481102-9497186 Glycine max
Glyma.11G125000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9481102-9491101 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312495 5265 Fabidae View MSA
124067650 5270 Rosid View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.42909 0.0 32.2246    
cufflinks 6.37857 0.0 29.0484   Low
cufflinks 12.5905 0.0 49.9639   High
cufflinks 9.00078 0.0 39.3177    
cufflinks 6.03399 0.0 28.0077   Low
cufflinks 10.3103 0.0 42.1808    
cufflinks 6.58638 0.0 27.2591   Low
cufflinks 10.158 0.0 42.2514    
cufflinks 9.11377 0.0 38.4393    
cufflinks 0.891        
cufflinks 0.895        
cufflinks 1.417       High
cufflinks 0.982        
cufflinks 0.635       Low
cufflinks 0.905        
cufflinks 0.952        
cufflinks 1.282       High
cufflinks 1.214       High
cufflinks 0.948        
cufflinks 1.095        
cufflinks 0.811       Low
cufflinks 1.147        
cufflinks 0.911        
cufflinks 0.98        
cufflinks 1.072        
cufflinks 0.853        

0 Strain