Gene : Glyma.11G125100 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1951 - GTP-binding protein AARP2 involved in 40S ribosome biogenesis Genomic Order:  1251
Name:  ? Glyma.11G125100 Secondary Identifier:  ? PAC:30529458
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G125100 0.5kb upstream 0.5kb upstream 9288 true Chr11: 9499197-9508484 Glycine max
Glyma.11G125100 0.5kb upstream 0.5kb upstream 500 false Chr11: 9499197-9499696 Glycine max
Glyma.11G125100 0.5kb downstream 0.5kb downstream 9288 true Chr11: 9499697-9508984 Glycine max
Glyma.11G125100 0.5kb downstream 0.5kb downstream 500 false Chr11: 9508485-9508984 Glycine max
Glyma.11G125100 1.0kb upstream 1.0kb upstream 9788 true Chr11: 9498697-9508484 Glycine max
Glyma.11G125100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9498697-9499696 Glycine max
Glyma.11G125100 1.0kb downstream 1.0kb downstream 9788 true Chr11: 9499697-9509484 Glycine max
Glyma.11G125100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9508485-9509484 Glycine max
Glyma.11G125100 2.0kb upstream 2.0kb upstream 10788 true Chr11: 9497697-9508484 Glycine max
Glyma.11G125100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9497697-9499696 Glycine max
Glyma.11G125100 2.0kb downstream 2.0kb downstream 10788 true Chr11: 9499697-9510484 Glycine max
Glyma.11G125100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9508485-9510484 Glycine max
Glyma.11G125100 5.0kb upstream 5.0kb upstream 13788 true Chr11: 9494697-9508484 Glycine max
Glyma.11G125100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9494697-9499696 Glycine max
Glyma.11G125100 5.0kb downstream 5.0kb downstream 13788 true Chr11: 9499697-9513484 Glycine max
Glyma.11G125100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9508485-9513484 Glycine max
Glyma.11G125100 10.0kb upstream 10.0kb upstream 18788 true Chr11: 9489697-9508484 Glycine max
Glyma.11G125100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9489697-9499696 Glycine max
Glyma.11G125100 10.0kb downstream 10.0kb downstream 18788 true Chr11: 9499697-9518484 Glycine max
Glyma.11G125100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9508485-9518484 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306986 5265 Fabidae View MSA
124068054 5270 Rosid View MSA
123746170 5271 Pentapetalae View MSA
122788558 5272 Eudicot View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.52422 0.0 25.5937   High
cufflinks 5.88662 0.0 15.7139    
cufflinks 4.43948 0.0 11.9227   Low
cufflinks 6.84937 0.0 18.2767    
cufflinks 9.92785 0.0 26.714   High
cufflinks 3.698 0.0 10.0344   Low
cufflinks 8.29116 0.0 22.1731    
cufflinks 5.5965 0.0 14.9478    
cufflinks 6.84118 0.0 18.2528    
cufflinks 3.091        
cufflinks 1.194       Low
cufflinks 4.993        
cufflinks 7.957     High High
cufflinks 9.507     High High
cufflinks 2.432        
cufflinks 2.927        
cufflinks 2.53        
cufflinks 4.212        
cufflinks 5.644       High
cufflinks 1.666       Low
cufflinks 2.253        
cufflinks 2.242        
cufflinks 3.805        
cufflinks 1.592       Low
cufflinks 2.276        
cufflinks 3.183        

0 Strain