Gene : Glyma.11G125300 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR11165 - SKP1 Genomic Order:  1253
Name:  ? Glyma.11G125300 Secondary Identifier:  ? PAC:30531209
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G125300 0.5kb upstream 0.5kb upstream 1729 true Chr11: 9519488-9521216 Glycine max
Glyma.11G125300 0.5kb upstream 0.5kb upstream 500 false Chr11: 9519488-9519987 Glycine max
Glyma.11G125300 0.5kb downstream 0.5kb downstream 1729 true Chr11: 9519988-9521716 Glycine max
Glyma.11G125300 0.5kb downstream 0.5kb downstream 500 false Chr11: 9521217-9521716 Glycine max
Glyma.11G125300 1.0kb upstream 1.0kb upstream 2229 true Chr11: 9518988-9521216 Glycine max
Glyma.11G125300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9518988-9519987 Glycine max
Glyma.11G125300 1.0kb downstream 1.0kb downstream 2229 true Chr11: 9519988-9522216 Glycine max
Glyma.11G125300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9521217-9522216 Glycine max
Glyma.11G125300 2.0kb upstream 2.0kb upstream 3229 true Chr11: 9517988-9521216 Glycine max
Glyma.11G125300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9517988-9519987 Glycine max
Glyma.11G125300 2.0kb downstream 2.0kb downstream 3229 true Chr11: 9519988-9523216 Glycine max
Glyma.11G125300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9521217-9523216 Glycine max
Glyma.11G125300 5.0kb upstream 5.0kb upstream 6229 true Chr11: 9514988-9521216 Glycine max
Glyma.11G125300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9514988-9519987 Glycine max
Glyma.11G125300 5.0kb downstream 5.0kb downstream 6229 true Chr11: 9519988-9526216 Glycine max
Glyma.11G125300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9521217-9526216 Glycine max
Glyma.11G125300 10.0kb upstream 10.0kb upstream 11229 true Chr11: 9509988-9521216 Glycine max
Glyma.11G125300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9509988-9519987 Glycine max
Glyma.11G125300 10.0kb downstream 10.0kb downstream 11229 true Chr11: 9519988-9531216 Glycine max
Glyma.11G125300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9521217-9531216 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029816 5273 Angiosperm View MSA
122313171 5265 Fabidae View MSA
124075211 5270 Rosid View MSA
123757626 5271 Pentapetalae View MSA
122798327 5272 Eudicot View MSA
121299090 5274 Embryophyte View MSA
123337010 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38981 0.0 4.8841    
cufflinks 1.0417 0.0 3.74798    
cufflinks 0.482191 0.0 1.81288   Low
cufflinks 1.53519 0.0 5.3567    
cufflinks 3.23021 0.0 10.2328    
cufflinks 3.08346 0.0 9.89973    
cufflinks 1.46218 0.0 5.11585    
cufflinks 1.45813 0.0 5.10877    
cufflinks 16.2421 0.0 43.6174   High
cufflinks 1.328        
cufflinks 0.736        
cufflinks 0.792        
cufflinks 0.886        
cufflinks 1.316        
cufflinks 2.513       High
cufflinks 0.655        
cufflinks 2.385       High
cufflinks 1.208        
cufflinks 0.56        
cufflinks 0.465       Low
cufflinks 0.473       Low
cufflinks 0.468       Low
cufflinks 0.481       Low
cufflinks 0.851        
cufflinks 0.442       Low
cufflinks 1.697       High

0 Strain