Gene : Glyma.11G129000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11685:SF135 - E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED Genomic Order:  1290
Name:  ? Glyma.11G129000 Secondary Identifier:  ? PAC:30530077
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G129000 0.5kb upstream 0.5kb upstream 8260 true Chr11: 9795351-9803610 Glycine max
Glyma.11G129000 0.5kb upstream 0.5kb upstream 500 false Chr11: 9803111-9803610 Glycine max
Glyma.11G129000 0.5kb downstream 0.5kb downstream 8260 true Chr11: 9794851-9803110 Glycine max
Glyma.11G129000 0.5kb downstream 0.5kb downstream 500 false Chr11: 9794851-9795350 Glycine max
Glyma.11G129000 1.0kb upstream 1.0kb upstream 8760 true Chr11: 9795351-9804110 Glycine max
Glyma.11G129000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9803111-9804110 Glycine max
Glyma.11G129000 1.0kb downstream 1.0kb downstream 8760 true Chr11: 9794351-9803110 Glycine max
Glyma.11G129000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9794351-9795350 Glycine max
Glyma.11G129000 2.0kb upstream 2.0kb upstream 9760 true Chr11: 9795351-9805110 Glycine max
Glyma.11G129000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9803111-9805110 Glycine max
Glyma.11G129000 2.0kb downstream 2.0kb downstream 9760 true Chr11: 9793351-9803110 Glycine max
Glyma.11G129000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9793351-9795350 Glycine max
Glyma.11G129000 5.0kb upstream 5.0kb upstream 12760 true Chr11: 9795351-9808110 Glycine max
Glyma.11G129000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9803111-9808110 Glycine max
Glyma.11G129000 5.0kb downstream 5.0kb downstream 12760 true Chr11: 9790351-9803110 Glycine max
Glyma.11G129000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9790351-9795350 Glycine max
Glyma.11G129000 10.0kb upstream 10.0kb upstream 17760 true Chr11: 9795351-9813110 Glycine max
Glyma.11G129000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9803111-9813110 Glycine max
Glyma.11G129000 10.0kb downstream 10.0kb downstream 17760 true Chr11: 9785351-9803110 Glycine max
Glyma.11G129000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9785351-9795350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314915 5265 Fabidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1393 0.0 51.656    
cufflinks 11.7525 0.0 31.3547    
cufflinks 32.7405 0.0 92.56 High High
cufflinks 14.3492 0.0 38.354    
cufflinks 11.0886 0.0 29.5929   Low
cufflinks 21.9202 0.0 59.6259    
cufflinks 13.0353 0.0 34.7836    
cufflinks 14.0037 0.0 37.4124    
cufflinks 12.8738 0.0 34.356    
cufflinks 3.883        
cufflinks 9.06     High High
cufflinks 6.816        
cufflinks 3.653        
cufflinks 2.636       Low
cufflinks 7.002     High  
cufflinks 3.923        
cufflinks 7.047     High  
cufflinks 4.977        
cufflinks 4.359        
cufflinks 3.996        
cufflinks 8.673     High High
cufflinks 4.391        
cufflinks 4.444        
cufflinks 9.89     High High
cufflinks 3.893        
cufflinks 12.036     High High

0 Strain