Gene : Glyma.11G116800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10920:SF13 - PRE-RRNA PROCESSING PROTEIN FTSJ3 Genomic Order:  1168
Name:  ? Glyma.11G116800 Secondary Identifier:  ? PAC:30528958
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G116800 0.5kb upstream 0.5kb upstream 5741 true Chr11: 8886080-8891820 Glycine max
Glyma.11G116800 0.5kb upstream 0.5kb upstream 500 false Chr11: 8886080-8886579 Glycine max
Glyma.11G116800 0.5kb downstream 0.5kb downstream 5741 true Chr11: 8886580-8892320 Glycine max
Glyma.11G116800 0.5kb downstream 0.5kb downstream 500 false Chr11: 8891821-8892320 Glycine max
Glyma.11G116800 1.0kb upstream 1.0kb upstream 6241 true Chr11: 8885580-8891820 Glycine max
Glyma.11G116800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8885580-8886579 Glycine max
Glyma.11G116800 1.0kb downstream 1.0kb downstream 6241 true Chr11: 8886580-8892820 Glycine max
Glyma.11G116800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8891821-8892820 Glycine max
Glyma.11G116800 2.0kb upstream 2.0kb upstream 7241 true Chr11: 8884580-8891820 Glycine max
Glyma.11G116800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8884580-8886579 Glycine max
Glyma.11G116800 2.0kb downstream 2.0kb downstream 7241 true Chr11: 8886580-8893820 Glycine max
Glyma.11G116800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8891821-8893820 Glycine max
Glyma.11G116800 5.0kb upstream 5.0kb upstream 10241 true Chr11: 8881580-8891820 Glycine max
Glyma.11G116800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8881580-8886579 Glycine max
Glyma.11G116800 5.0kb downstream 5.0kb downstream 10241 true Chr11: 8886580-8896820 Glycine max
Glyma.11G116800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8891821-8896820 Glycine max
Glyma.11G116800 10.0kb upstream 10.0kb upstream 15241 true Chr11: 8876580-8891820 Glycine max
Glyma.11G116800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8876580-8886579 Glycine max
Glyma.11G116800 10.0kb downstream 10.0kb downstream 15241 true Chr11: 8886580-8901820 Glycine max
Glyma.11G116800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8891821-8901820 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303190 5265 Fabidae View MSA
124066192 5270 Rosid View MSA
123747132 5271 Pentapetalae View MSA
122787166 5272 Eudicot View MSA
122043455 5273 Angiosperm View MSA
121347110 5274 Embryophyte View MSA
123425494 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.627 0.0 33.9535    
cufflinks 8.50618 0.0 22.6937    
cufflinks 4.06255 0.0 11.1338   Low
cufflinks 7.34239 0.0 19.6085    
cufflinks 16.3665 0.0 44.6544   High
cufflinks 5.24438 0.0 14.1679   Low
cufflinks 11.1174 0.0 29.762    
cufflinks 9.33118 0.0 24.9061    
cufflinks 8.51433 0.0 22.7153    
cufflinks 5.781        
cufflinks 3.034       Low
cufflinks 6.596        
cufflinks 14.611     High High
cufflinks 21.047     High High
cufflinks 3.441        
cufflinks 5.041        
cufflinks 4.968        
cufflinks 6.078        
cufflinks 8.279     High  
cufflinks 3.58        
cufflinks 4.218        
cufflinks 4.149        
cufflinks 6.197        
cufflinks 2.623       Low
cufflinks 4.247        
cufflinks 6.789     High  

0 Strain