Gene : Glyma.11G118900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12802:SF39 - SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  1189
Name:  ? Glyma.11G118900 Secondary Identifier:  ? PAC:30528098
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G118900 0.5kb upstream 0.5kb upstream 7586 true Chr11: 9028386-9035971 Glycine max
Glyma.11G118900 0.5kb upstream 0.5kb upstream 500 false Chr11: 9035472-9035971 Glycine max
Glyma.11G118900 0.5kb downstream 0.5kb downstream 7586 true Chr11: 9027886-9035471 Glycine max
Glyma.11G118900 0.5kb downstream 0.5kb downstream 500 false Chr11: 9027886-9028385 Glycine max
Glyma.11G118900 1.0kb upstream 1.0kb upstream 8086 true Chr11: 9028386-9036471 Glycine max
Glyma.11G118900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9035472-9036471 Glycine max
Glyma.11G118900 1.0kb downstream 1.0kb downstream 8086 true Chr11: 9027386-9035471 Glycine max
Glyma.11G118900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9027386-9028385 Glycine max
Glyma.11G118900 2.0kb upstream 2.0kb upstream 9086 true Chr11: 9028386-9037471 Glycine max
Glyma.11G118900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9035472-9037471 Glycine max
Glyma.11G118900 2.0kb downstream 2.0kb downstream 9086 true Chr11: 9026386-9035471 Glycine max
Glyma.11G118900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9026386-9028385 Glycine max
Glyma.11G118900 5.0kb upstream 5.0kb upstream 12086 true Chr11: 9028386-9040471 Glycine max
Glyma.11G118900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9035472-9040471 Glycine max
Glyma.11G118900 5.0kb downstream 5.0kb downstream 12086 true Chr11: 9023386-9035471 Glycine max
Glyma.11G118900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9023386-9028385 Glycine max
Glyma.11G118900 10.0kb upstream 10.0kb upstream 17086 true Chr11: 9028386-9045471 Glycine max
Glyma.11G118900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9035472-9045471 Glycine max
Glyma.11G118900 10.0kb downstream 10.0kb downstream 17086 true Chr11: 9018386-9035471 Glycine max
Glyma.11G118900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9018386-9028385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304014 5265 Fabidae View MSA
124063098 5270 Rosid View MSA
123749102 5271 Pentapetalae View MSA
122792303 5272 Eudicot View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.2547 0.0 16.45    
cufflinks 4.44657 0.0 14.2249    
cufflinks 6.17147 0.0 21.7083   High
cufflinks 5.02602 0.0 18.0466    
cufflinks 4.56718 0.0 16.6592    
cufflinks 3.31787 0.0 11.4247   Low
cufflinks 4.97261 0.0 15.7961    
cufflinks 3.96856 0.0 14.8828    
cufflinks 4.94303 0.0 18.0315    
cufflinks 0.998        
cufflinks 0.76       Low
cufflinks 1.263        
cufflinks 1.122        
cufflinks 1.11        
cufflinks 1.813       High
cufflinks 1.36        
cufflinks 0.668       Low
cufflinks 1.349        
cufflinks 1.427        
cufflinks 1.421        
cufflinks 0.925        
cufflinks 1.471        
cufflinks 1.61       High
cufflinks 0.734       Low
cufflinks 1.371        
cufflinks 0.853       Low

0 Strain