Gene : Glyma.11G120200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30546//PTHR30546:SF8 - FLAVODOXIN-RELATED PROTEIN WRBA-RELATED Genomic Order:  1202
Name:  ? Glyma.11G120200 Secondary Identifier:  ? PAC:30530240
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G120200 0.5kb upstream 0.5kb upstream 3193 true Chr11: 9173585-9176777 Glycine max
Glyma.11G120200 0.5kb upstream 0.5kb upstream 500 false Chr11: 9173585-9174084 Glycine max
Glyma.11G120200 0.5kb downstream 0.5kb downstream 3193 true Chr11: 9174085-9177277 Glycine max
Glyma.11G120200 0.5kb downstream 0.5kb downstream 500 false Chr11: 9176778-9177277 Glycine max
Glyma.11G120200 1.0kb upstream 1.0kb upstream 3693 true Chr11: 9173085-9176777 Glycine max
Glyma.11G120200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9173085-9174084 Glycine max
Glyma.11G120200 1.0kb downstream 1.0kb downstream 3693 true Chr11: 9174085-9177777 Glycine max
Glyma.11G120200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9176778-9177777 Glycine max
Glyma.11G120200 2.0kb upstream 2.0kb upstream 4693 true Chr11: 9172085-9176777 Glycine max
Glyma.11G120200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9172085-9174084 Glycine max
Glyma.11G120200 2.0kb downstream 2.0kb downstream 4693 true Chr11: 9174085-9178777 Glycine max
Glyma.11G120200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9176778-9178777 Glycine max
Glyma.11G120200 5.0kb upstream 5.0kb upstream 7693 true Chr11: 9169085-9176777 Glycine max
Glyma.11G120200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9169085-9174084 Glycine max
Glyma.11G120200 5.0kb downstream 5.0kb downstream 7693 true Chr11: 9174085-9181777 Glycine max
Glyma.11G120200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9176778-9181777 Glycine max
Glyma.11G120200 10.0kb upstream 10.0kb upstream 12693 true Chr11: 9164085-9176777 Glycine max
Glyma.11G120200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9164085-9174084 Glycine max
Glyma.11G120200 10.0kb downstream 10.0kb downstream 12693 true Chr11: 9174085-9186777 Glycine max
Glyma.11G120200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9176778-9186777 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10523 0.0 6.89306    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.870104 0.0 3.10662    
cufflinks 0.121092 0.0 0.47625 Low Low
cufflinks 14.3044 0.0 38.2875    
cufflinks 319.182 0.0 1331.99 High High
cufflinks 0.065475 0.0 0.263502 Low Low
cufflinks 1.58728 0.0 5.37907    
cufflinks 17.6271 0.0 47.0302    
cufflinks 0.663        
cufflinks 65.841     High High
cufflinks 0.826        
cufflinks 44.042     High High
cufflinks 10.017     High  
cufflinks 8.338     High  
cufflinks 0.095     Low Low
cufflinks 61.564     High High
cufflinks 0.096     Low Low
cufflinks 0.074     Low Low
cufflinks 0.052     Low Low
cufflinks 44.173     High High
cufflinks 0.106        
cufflinks 0.144        
cufflinks 74.849     High High
cufflinks 0.075     Low Low
cufflinks 43.058     High High

0 Strain