Gene : Glyma.11G120300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10830 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT Genomic Order:  1203
Name:  ? Glyma.11G120300 Secondary Identifier:  ? PAC:30527833
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G120300 0.5kb upstream 0.5kb upstream 4877 true Chr11: 9178050-9182926 Glycine max
Glyma.11G120300 0.5kb upstream 0.5kb upstream 500 false Chr11: 9178050-9178549 Glycine max
Glyma.11G120300 0.5kb downstream 0.5kb downstream 4877 true Chr11: 9178550-9183426 Glycine max
Glyma.11G120300 0.5kb downstream 0.5kb downstream 500 false Chr11: 9182927-9183426 Glycine max
Glyma.11G120300 1.0kb upstream 1.0kb upstream 5377 true Chr11: 9177550-9182926 Glycine max
Glyma.11G120300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9177550-9178549 Glycine max
Glyma.11G120300 1.0kb downstream 1.0kb downstream 5377 true Chr11: 9178550-9183926 Glycine max
Glyma.11G120300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9182927-9183926 Glycine max
Glyma.11G120300 2.0kb upstream 2.0kb upstream 6377 true Chr11: 9176550-9182926 Glycine max
Glyma.11G120300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9176550-9178549 Glycine max
Glyma.11G120300 2.0kb downstream 2.0kb downstream 6377 true Chr11: 9178550-9184926 Glycine max
Glyma.11G120300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9182927-9184926 Glycine max
Glyma.11G120300 5.0kb upstream 5.0kb upstream 9377 true Chr11: 9173550-9182926 Glycine max
Glyma.11G120300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9173550-9178549 Glycine max
Glyma.11G120300 5.0kb downstream 5.0kb downstream 9377 true Chr11: 9178550-9187926 Glycine max
Glyma.11G120300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9182927-9187926 Glycine max
Glyma.11G120300 10.0kb upstream 10.0kb upstream 14377 true Chr11: 9168550-9182926 Glycine max
Glyma.11G120300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9168550-9178549 Glycine max
Glyma.11G120300 10.0kb downstream 10.0kb downstream 14377 true Chr11: 9178550-9192926 Glycine max
Glyma.11G120300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9182927-9192926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300131 5265 Fabidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.2772 0.0 140.327 High  
cufflinks 37.1281 0.0 134.002 High  
cufflinks 14.8958 0.0 52.5004   Low
cufflinks 50.5263 0.0 164.255 High  
cufflinks 66.1495 0.0 228.801 High High
cufflinks 44.012 0.0 164.073 High  
cufflinks 65.7607 0.0 225.765 High High
cufflinks 36.2549 0.0 112.038 High  
cufflinks 41.4976 0.0 152.648 High  
cufflinks 8.693     High  
cufflinks 1.366       Low
cufflinks 4.972        
cufflinks 13.789     High High
cufflinks 17.205     High High
cufflinks 1.347       Low
cufflinks 5.106        
cufflinks 3.373        
cufflinks 5.853        
cufflinks 8.812     High  
cufflinks 3.236        
cufflinks 2.809        
cufflinks 4.274        
cufflinks 6.271        
cufflinks 2.974        
cufflinks 3.237        
cufflinks 3.231        

0 Strain