Gene : Glyma.11G121200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12176:SF16 - PROTEIN C17E4.11 Genomic Order:  1212
Name:  ? Glyma.11G121200 Secondary Identifier:  ? PAC:30531539
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G121200 0.5kb upstream 0.5kb upstream 3194 true Chr11: 9252226-9255419 Glycine max
Glyma.11G121200 0.5kb upstream 0.5kb upstream 500 false Chr11: 9252226-9252725 Glycine max
Glyma.11G121200 0.5kb downstream 0.5kb downstream 3194 true Chr11: 9252726-9255919 Glycine max
Glyma.11G121200 0.5kb downstream 0.5kb downstream 500 false Chr11: 9255420-9255919 Glycine max
Glyma.11G121200 1.0kb upstream 1.0kb upstream 3694 true Chr11: 9251726-9255419 Glycine max
Glyma.11G121200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9251726-9252725 Glycine max
Glyma.11G121200 1.0kb downstream 1.0kb downstream 3694 true Chr11: 9252726-9256419 Glycine max
Glyma.11G121200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9255420-9256419 Glycine max
Glyma.11G121200 2.0kb upstream 2.0kb upstream 4694 true Chr11: 9250726-9255419 Glycine max
Glyma.11G121200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9250726-9252725 Glycine max
Glyma.11G121200 2.0kb downstream 2.0kb downstream 4694 true Chr11: 9252726-9257419 Glycine max
Glyma.11G121200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9255420-9257419 Glycine max
Glyma.11G121200 5.0kb upstream 5.0kb upstream 7694 true Chr11: 9247726-9255419 Glycine max
Glyma.11G121200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9247726-9252725 Glycine max
Glyma.11G121200 5.0kb downstream 5.0kb downstream 7694 true Chr11: 9252726-9260419 Glycine max
Glyma.11G121200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9255420-9260419 Glycine max
Glyma.11G121200 10.0kb upstream 10.0kb upstream 12694 true Chr11: 9242726-9255419 Glycine max
Glyma.11G121200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9242726-9252725 Glycine max
Glyma.11G121200 10.0kb downstream 10.0kb downstream 12694 true Chr11: 9252726-9265419 Glycine max
Glyma.11G121200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9255420-9265419 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302589 5265 Fabidae View MSA
124067500 5270 Rosid View MSA
123737258 5271 Pentapetalae View MSA
122789962 5272 Eudicot View MSA
122046876 5273 Angiosperm View MSA
121344450 5274 Embryophyte View MSA
123426760 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.44012 0.0 17.0438    
cufflinks 3.16397 0.0 10.6733   Low
cufflinks 2.96467 0.0 10.0411   Low
cufflinks 2.7247 0.0 9.32641   Low
cufflinks 6.07792 0.0 18.7237    
cufflinks 7.04263 0.0 21.2463   High
cufflinks 4.58853 0.0 14.6975    
cufflinks 5.36099 0.0 16.7946    
cufflinks 6.21816 0.0 19.0929    
cufflinks 1.669        
cufflinks 0.85       Low
cufflinks 1.421        
cufflinks 3.164       High
cufflinks 4.731       High
cufflinks 1.554        
cufflinks 1.176        
cufflinks 1.74        
cufflinks 1.481        
cufflinks 2.112        
cufflinks 1.123        
cufflinks 1.392        
cufflinks 1.207        
cufflinks 1.693        
cufflinks 1.267        
cufflinks 1.189        
cufflinks 1.911        

0 Strain