Gene : Glyma.11G111900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3725 - SH3 domain protein SH3GLB Genomic Order:  1119
Name:  ? Glyma.11G111900 Secondary Identifier:  ? PAC:30529036
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G111900 0.5kb upstream 0.5kb upstream 4081 true Chr11: 8528590-8532670 Glycine max
Glyma.11G111900 0.5kb upstream 0.5kb upstream 500 false Chr11: 8528590-8529089 Glycine max
Glyma.11G111900 0.5kb downstream 0.5kb downstream 4081 true Chr11: 8529090-8533170 Glycine max
Glyma.11G111900 0.5kb downstream 0.5kb downstream 500 false Chr11: 8532671-8533170 Glycine max
Glyma.11G111900 1.0kb upstream 1.0kb upstream 4581 true Chr11: 8528090-8532670 Glycine max
Glyma.11G111900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8528090-8529089 Glycine max
Glyma.11G111900 1.0kb downstream 1.0kb downstream 4581 true Chr11: 8529090-8533670 Glycine max
Glyma.11G111900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8532671-8533670 Glycine max
Glyma.11G111900 2.0kb upstream 2.0kb upstream 5581 true Chr11: 8527090-8532670 Glycine max
Glyma.11G111900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8527090-8529089 Glycine max
Glyma.11G111900 2.0kb downstream 2.0kb downstream 5581 true Chr11: 8529090-8534670 Glycine max
Glyma.11G111900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8532671-8534670 Glycine max
Glyma.11G111900 5.0kb upstream 5.0kb upstream 8581 true Chr11: 8524090-8532670 Glycine max
Glyma.11G111900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8524090-8529089 Glycine max
Glyma.11G111900 5.0kb downstream 5.0kb downstream 8581 true Chr11: 8529090-8537670 Glycine max
Glyma.11G111900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8532671-8537670 Glycine max
Glyma.11G111900 10.0kb upstream 10.0kb upstream 13581 true Chr11: 8519090-8532670 Glycine max
Glyma.11G111900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8519090-8529089 Glycine max
Glyma.11G111900 10.0kb downstream 10.0kb downstream 13581 true Chr11: 8529090-8542670 Glycine max
Glyma.11G111900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8532671-8542670 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298030 5265 Fabidae View MSA
124068234 5270 Rosid View MSA
123743679 5271 Pentapetalae View MSA
122794557 5272 Eudicot View MSA
122046082 5273 Angiosperm View MSA
121348506 5274 Embryophyte View MSA
123380886 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2436 0.0 47.2435    
cufflinks 8.41989 0.0 37.4276    
cufflinks 7.1515 0.0 32.4506   Low
cufflinks 13.2418 0.0 55.7517    
cufflinks 11.3244 0.0 47.6889    
cufflinks 8.85686 0.0 38.6815    
cufflinks 12.3356 0.0 51.5964    
cufflinks 15.8348 0.0 65.3356   High
cufflinks 10.3397 0.0 44.7287    
cufflinks 1.585        
cufflinks 0.47       Low
cufflinks 0.945        
cufflinks 1.768       High
cufflinks 1.841       High
cufflinks 0.457       Low
cufflinks 1.494        
cufflinks 0.921        
cufflinks 1.21        
cufflinks 1.444        
cufflinks 1.649        
cufflinks 0.789        
cufflinks 1.632        
cufflinks 1.335        
cufflinks 0.709       Low
cufflinks 1.618        
cufflinks 0.935        

0 Strain