Gene : Glyma.11G163400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10108//PTHR10108:SF885 - METHYLTRANSFERASE Genomic Order:  1634
Name:  ? Glyma.11G163400 Secondary Identifier:  ? PAC:30529049
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G163400 0.5kb upstream 0.5kb upstream 2435 true Chr11: 15318089-15320523 Glycine max
Glyma.11G163400 0.5kb upstream 0.5kb upstream 500 false Chr11: 15318089-15318588 Glycine max
Glyma.11G163400 0.5kb downstream 0.5kb downstream 2435 true Chr11: 15318589-15321023 Glycine max
Glyma.11G163400 0.5kb downstream 0.5kb downstream 500 false Chr11: 15320524-15321023 Glycine max
Glyma.11G163400 1.0kb upstream 1.0kb upstream 2935 true Chr11: 15317589-15320523 Glycine max
Glyma.11G163400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15317589-15318588 Glycine max
Glyma.11G163400 1.0kb downstream 1.0kb downstream 2935 true Chr11: 15318589-15321523 Glycine max
Glyma.11G163400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15320524-15321523 Glycine max
Glyma.11G163400 2.0kb upstream 2.0kb upstream 3935 true Chr11: 15316589-15320523 Glycine max
Glyma.11G163400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15316589-15318588 Glycine max
Glyma.11G163400 2.0kb downstream 2.0kb downstream 3935 true Chr11: 15318589-15322523 Glycine max
Glyma.11G163400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15320524-15322523 Glycine max
Glyma.11G163400 5.0kb upstream 5.0kb upstream 6935 true Chr11: 15313589-15320523 Glycine max
Glyma.11G163400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15313589-15318588 Glycine max
Glyma.11G163400 5.0kb downstream 5.0kb downstream 6935 true Chr11: 15318589-15325523 Glycine max
Glyma.11G163400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15320524-15325523 Glycine max
Glyma.11G163400 10.0kb upstream 10.0kb upstream 11935 true Chr11: 15308589-15320523 Glycine max
Glyma.11G163400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15308589-15318588 Glycine max
Glyma.11G163400 10.0kb downstream 10.0kb downstream 11935 true Chr11: 15318589-15330523 Glycine max
Glyma.11G163400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15320524-15330523 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299655 5265 Fabidae View MSA
124069887 5270 Rosid View MSA
123751423 5271 Pentapetalae View MSA
122774012 5272 Eudicot View MSA
122042420 5273 Angiosperm View MSA
121350932 5274 Embryophyte View MSA
123427033 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.267864 0.0 1.01672   High
cufflinks 0.126961 0.0 0.497755 Low  
cufflinks 0.0773762 0.0 0.309126 Low  
cufflinks 0.0836332 0.0 0.33277 Low  
cufflinks 0.0962907 0.0 0.380657 Low  
cufflinks 0.0430864 0.0 0.17616 Low Low
cufflinks 0.153772 0.0 0.598097 Low  
cufflinks 0.0350534 0.0 0.145165 Low Low
cufflinks 0.338563 0.0 1.27195   High
cufflinks 0.075     Low  
cufflinks 0.564       High
cufflinks 0.138        
cufflinks 0.008     Low Low
cufflinks 0.107        
cufflinks 0.408        
cufflinks 0.038     Low  
cufflinks 1.792       High
cufflinks 0.045     Low  
cufflinks 0.288        
cufflinks 0.065     Low  
cufflinks 0.446        
cufflinks 0.048     Low  
cufflinks 0.092     Low  
cufflinks 0.28        
cufflinks 0.048     Low  
cufflinks 0.943       High

0 Strain