Gene : Glyma.11G164800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31301:SF4 - LOB DOMAIN-CONTAINING PROTEIN 12 Genomic Order:  1648
Name:  ? Glyma.11G164800 Secondary Identifier:  ? PAC:30530498
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G164800 0.5kb upstream 0.5kb upstream 2078 true Chr11: 15688962-15691039 Glycine max
Glyma.11G164800 0.5kb upstream 0.5kb upstream 500 false Chr11: 15690540-15691039 Glycine max
Glyma.11G164800 0.5kb downstream 0.5kb downstream 2078 true Chr11: 15688462-15690539 Glycine max
Glyma.11G164800 0.5kb downstream 0.5kb downstream 500 false Chr11: 15688462-15688961 Glycine max
Glyma.11G164800 1.0kb upstream 1.0kb upstream 2578 true Chr11: 15688962-15691539 Glycine max
Glyma.11G164800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15690540-15691539 Glycine max
Glyma.11G164800 1.0kb downstream 1.0kb downstream 2578 true Chr11: 15687962-15690539 Glycine max
Glyma.11G164800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15687962-15688961 Glycine max
Glyma.11G164800 2.0kb upstream 2.0kb upstream 3578 true Chr11: 15688962-15692539 Glycine max
Glyma.11G164800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15690540-15692539 Glycine max
Glyma.11G164800 2.0kb downstream 2.0kb downstream 3578 true Chr11: 15686962-15690539 Glycine max
Glyma.11G164800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15686962-15688961 Glycine max
Glyma.11G164800 5.0kb upstream 5.0kb upstream 6578 true Chr11: 15688962-15695539 Glycine max
Glyma.11G164800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15690540-15695539 Glycine max
Glyma.11G164800 5.0kb downstream 5.0kb downstream 6578 true Chr11: 15683962-15690539 Glycine max
Glyma.11G164800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15683962-15688961 Glycine max
Glyma.11G164800 10.0kb upstream 10.0kb upstream 11578 true Chr11: 15688962-15700539 Glycine max
Glyma.11G164800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15690540-15700539 Glycine max
Glyma.11G164800 10.0kb downstream 10.0kb downstream 11578 true Chr11: 15678962-15690539 Glycine max
Glyma.11G164800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15678962-15688961 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304114 5265 Fabidae View MSA
124071000 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0746785 0.0 0.318242 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0230958 0.0 0.109272 Low  
cufflinks 0.0201786 0.0 0.0970195 Low Low
cufflinks 1.35029 0.0 5.01789    
cufflinks 2.49126 0.0 8.93594   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.035979 0.0 0.16284 Low  
cufflinks 1.01433 0.0 3.81681    
cufflinks 0.084     Low  
cufflinks 0.624        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.777       High
cufflinks 2.086       High
cufflinks 0.072        
cufflinks 0.119        
cufflinks 0.671        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099        
cufflinks 0.779        
cufflinks 0.2        
cufflinks 0.241        
cufflinks 0.626        
cufflinks 0.101        
cufflinks 2.355       High

0 Strain