Gene : Glyma.11G165500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11670:SF40 - ACONITATE HYDRATASE 1 Genomic Order:  1655
Name:  ? Glyma.11G165500 Secondary Identifier:  ? PAC:30531568
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G165500 0.5kb upstream 0.5kb upstream 4416 true Chr11: 15755751-15760166 Glycine max
Glyma.11G165500 0.5kb upstream 0.5kb upstream 500 false Chr11: 15755751-15756250 Glycine max
Glyma.11G165500 0.5kb downstream 0.5kb downstream 4416 true Chr11: 15756251-15760666 Glycine max
Glyma.11G165500 0.5kb downstream 0.5kb downstream 500 false Chr11: 15760167-15760666 Glycine max
Glyma.11G165500 1.0kb upstream 1.0kb upstream 4916 true Chr11: 15755251-15760166 Glycine max
Glyma.11G165500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15755251-15756250 Glycine max
Glyma.11G165500 1.0kb downstream 1.0kb downstream 4916 true Chr11: 15756251-15761166 Glycine max
Glyma.11G165500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15760167-15761166 Glycine max
Glyma.11G165500 2.0kb upstream 2.0kb upstream 5916 true Chr11: 15754251-15760166 Glycine max
Glyma.11G165500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15754251-15756250 Glycine max
Glyma.11G165500 2.0kb downstream 2.0kb downstream 5916 true Chr11: 15756251-15762166 Glycine max
Glyma.11G165500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15760167-15762166 Glycine max
Glyma.11G165500 5.0kb upstream 5.0kb upstream 8916 true Chr11: 15751251-15760166 Glycine max
Glyma.11G165500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15751251-15756250 Glycine max
Glyma.11G165500 5.0kb downstream 5.0kb downstream 8916 true Chr11: 15756251-15765166 Glycine max
Glyma.11G165500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15760167-15765166 Glycine max
Glyma.11G165500 10.0kb upstream 10.0kb upstream 13916 true Chr11: 15746251-15760166 Glycine max
Glyma.11G165500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15746251-15756250 Glycine max
Glyma.11G165500 10.0kb downstream 10.0kb downstream 13916 true Chr11: 15756251-15770166 Glycine max
Glyma.11G165500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15760167-15770166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615532 5273 Angiosperm View MSA
122250584 5265 Fabidae View MSA
123993724 5270 Rosid View MSA
123568461 5271 Pentapetalae View MSA
122603206 5272 Eudicot View MSA
120887722 5274 Embryophyte View MSA
122928476 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0773313 0.0 0.320851 Low  
cufflinks 0.0208343 0.0 0.111872 Low Low
cufflinks 0.216296 0.0 0.853659 Low  
cufflinks 0.611982 0.0 4.07104   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.004     Low High
cufflinks 0.002     Low  

0 Strain