Gene : Glyma.11G168600 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2612 - Predicted integral membrane protein Genomic Order:  1686
Name:  ? Glyma.11G168600 Secondary Identifier:  ? PAC:30531550
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G168600 0.5kb upstream 0.5kb upstream 4295 true Chr11: 17273788-17278082 Glycine max
Glyma.11G168600 0.5kb upstream 0.5kb upstream 500 false Chr11: 17273788-17274287 Glycine max
Glyma.11G168600 0.5kb downstream 0.5kb downstream 4295 true Chr11: 17274288-17278582 Glycine max
Glyma.11G168600 0.5kb downstream 0.5kb downstream 500 false Chr11: 17278083-17278582 Glycine max
Glyma.11G168600 1.0kb upstream 1.0kb upstream 4795 true Chr11: 17273288-17278082 Glycine max
Glyma.11G168600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17273288-17274287 Glycine max
Glyma.11G168600 1.0kb downstream 1.0kb downstream 4795 true Chr11: 17274288-17279082 Glycine max
Glyma.11G168600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17278083-17279082 Glycine max
Glyma.11G168600 2.0kb upstream 2.0kb upstream 5795 true Chr11: 17272288-17278082 Glycine max
Glyma.11G168600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17272288-17274287 Glycine max
Glyma.11G168600 2.0kb downstream 2.0kb downstream 5795 true Chr11: 17274288-17280082 Glycine max
Glyma.11G168600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17278083-17280082 Glycine max
Glyma.11G168600 5.0kb upstream 5.0kb upstream 8795 true Chr11: 17269288-17278082 Glycine max
Glyma.11G168600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17269288-17274287 Glycine max
Glyma.11G168600 5.0kb downstream 5.0kb downstream 8795 true Chr11: 17274288-17283082 Glycine max
Glyma.11G168600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17278083-17283082 Glycine max
Glyma.11G168600 10.0kb upstream 10.0kb upstream 13795 true Chr11: 17264288-17278082 Glycine max
Glyma.11G168600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17264288-17274287 Glycine max
Glyma.11G168600 10.0kb downstream 10.0kb downstream 13795 true Chr11: 17274288-17288082 Glycine max
Glyma.11G168600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17278083-17288082 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301384 5265 Fabidae View MSA
124065266 5270 Rosid View MSA
123740415 5271 Pentapetalae View MSA
122791070 5272 Eudicot View MSA
122047001 5273 Angiosperm View MSA
121343910 5274 Embryophyte View MSA
123425700 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.80426 0.0 19.317   Low
cufflinks 11.2245 0.0 51.9023    
cufflinks 8.4465 0.0 32.7973    
cufflinks 9.85992 0.0 37.3218    
cufflinks 8.3106 0.0 33.4202    
cufflinks 8.92949 0.0 34.5945    
cufflinks 13.1818 0.0 59.8246   High
cufflinks 11.2075 0.0 41.0655    
cufflinks 8.4745 0.0 28.7674    
cufflinks 0.754       High
cufflinks 0.41        
cufflinks 0.737       High
cufflinks 0.727        
cufflinks 0.706        
cufflinks 0.342       Low
cufflinks 0.478        
cufflinks 0.248       Low
cufflinks 0.836       High
cufflinks 0.763       High
cufflinks 0.546        
cufflinks 0.371        
cufflinks 0.57        
cufflinks 0.504        
cufflinks 0.391        
cufflinks 0.553        
cufflinks 0.336       Low

0 Strain