Gene : Glyma.11G170900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24098:SF4 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-RELATED Genomic Order:  1709
Name:  ? Glyma.11G170900 Secondary Identifier:  ? PAC:30531595
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G170900 0.5kb upstream 0.5kb upstream 14465 true Chr11: 18345392-18359856 Glycine max
Glyma.11G170900 0.5kb upstream 0.5kb upstream 500 false Chr11: 18359357-18359856 Glycine max
Glyma.11G170900 0.5kb downstream 0.5kb downstream 14465 true Chr11: 18344892-18359356 Glycine max
Glyma.11G170900 0.5kb downstream 0.5kb downstream 500 false Chr11: 18344892-18345391 Glycine max
Glyma.11G170900 1.0kb upstream 1.0kb upstream 14965 true Chr11: 18345392-18360356 Glycine max
Glyma.11G170900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18359357-18360356 Glycine max
Glyma.11G170900 1.0kb downstream 1.0kb downstream 14965 true Chr11: 18344392-18359356 Glycine max
Glyma.11G170900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18344392-18345391 Glycine max
Glyma.11G170900 2.0kb upstream 2.0kb upstream 15965 true Chr11: 18345392-18361356 Glycine max
Glyma.11G170900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18359357-18361356 Glycine max
Glyma.11G170900 2.0kb downstream 2.0kb downstream 15965 true Chr11: 18343392-18359356 Glycine max
Glyma.11G170900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18343392-18345391 Glycine max
Glyma.11G170900 5.0kb upstream 5.0kb upstream 18965 true Chr11: 18345392-18364356 Glycine max
Glyma.11G170900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18359357-18364356 Glycine max
Glyma.11G170900 5.0kb downstream 5.0kb downstream 18965 true Chr11: 18340392-18359356 Glycine max
Glyma.11G170900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18340392-18345391 Glycine max
Glyma.11G170900 10.0kb upstream 10.0kb upstream 23965 true Chr11: 18345392-18369356 Glycine max
Glyma.11G170900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18359357-18369356 Glycine max
Glyma.11G170900 10.0kb downstream 10.0kb downstream 23965 true Chr11: 18335392-18359356 Glycine max
Glyma.11G170900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18335392-18345391 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312419 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.297609 0.0 1.27351    
cufflinks 0.38039 0.0 2.64502    
cufflinks 0.202301 0.0 2.01067 Low  
cufflinks 0.330221 0.0 3.29601    
cufflinks 0.0860192 0.0 0.439211 Low  
cufflinks 0.0240007 0.0 0.160392 Low Low
cufflinks 0.278601 0.0 1.23088    
cufflinks 0.332147 0.0 2.37737    
cufflinks 0.0525378 0.0 0.284194 Low Low
cufflinks 0.035     Low  
cufflinks 0.005     Low  
cufflinks 0.051     Low  
cufflinks 0.02     Low  
cufflinks 0.004     Low Low
cufflinks 0.002     Low Low
cufflinks 0.093     Low High
cufflinks 0.003     Low Low
cufflinks 0.084     Low  
cufflinks 0.032     Low  
cufflinks 0.104       High
cufflinks 0.003     Low Low
cufflinks 0.114       High
cufflinks 0.076     Low  
cufflinks 0.009     Low  
cufflinks 0.115       High
cufflinks 0.007     Low  

0 Strain