Gene : Glyma.11G171300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  1713
Name:  ? Glyma.11G171300 Secondary Identifier:  ? PAC:30529294
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G171300 0.5kb upstream 0.5kb upstream 5649 true Chr11: 18510523-18516171 Glycine max
Glyma.11G171300 0.5kb upstream 0.5kb upstream 500 false Chr11: 18510523-18511022 Glycine max
Glyma.11G171300 0.5kb downstream 0.5kb downstream 5649 true Chr11: 18511023-18516671 Glycine max
Glyma.11G171300 0.5kb downstream 0.5kb downstream 500 false Chr11: 18516172-18516671 Glycine max
Glyma.11G171300 1.0kb upstream 1.0kb upstream 6149 true Chr11: 18510023-18516171 Glycine max
Glyma.11G171300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18510023-18511022 Glycine max
Glyma.11G171300 1.0kb downstream 1.0kb downstream 6149 true Chr11: 18511023-18517171 Glycine max
Glyma.11G171300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18516172-18517171 Glycine max
Glyma.11G171300 2.0kb upstream 2.0kb upstream 7149 true Chr11: 18509023-18516171 Glycine max
Glyma.11G171300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18509023-18511022 Glycine max
Glyma.11G171300 2.0kb downstream 2.0kb downstream 7149 true Chr11: 18511023-18518171 Glycine max
Glyma.11G171300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18516172-18518171 Glycine max
Glyma.11G171300 5.0kb upstream 5.0kb upstream 10149 true Chr11: 18506023-18516171 Glycine max
Glyma.11G171300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18506023-18511022 Glycine max
Glyma.11G171300 5.0kb downstream 5.0kb downstream 10149 true Chr11: 18511023-18521171 Glycine max
Glyma.11G171300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18516172-18521171 Glycine max
Glyma.11G171300 10.0kb upstream 10.0kb upstream 15149 true Chr11: 18501023-18516171 Glycine max
Glyma.11G171300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18501023-18511022 Glycine max
Glyma.11G171300 10.0kb downstream 10.0kb downstream 15149 true Chr11: 18511023-18526171 Glycine max
Glyma.11G171300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18516172-18526171 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308287 5265 Fabidae View MSA
124066732 5270 Rosid View MSA
123736595 5271 Pentapetalae View MSA
122792961 5272 Eudicot View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279107 0.0 1.0657   Low
cufflinks 11.5502 0.0 31.3215   High
cufflinks 1.59887 0.0 5.46461    
cufflinks 7.48995 0.0 20.9833   High
cufflinks 2.40789 0.0 7.86582    
cufflinks 1.08477 0.0 3.84968    
cufflinks 1.93534 0.0 6.49029    
cufflinks 5.95922 0.0 17.1137    
cufflinks 1.41075 0.0 4.89777    
cufflinks 1.728        
cufflinks 0.235       Low
cufflinks 1.673        
cufflinks 0.477        
cufflinks 0.572        
cufflinks 0.253       Low
cufflinks 1.423        
cufflinks 0.253       Low
cufflinks 3.504       High
cufflinks 3.697       High
cufflinks 1.137        
cufflinks 0.237       Low
cufflinks 1.431        
cufflinks 1.417        
cufflinks 0.175       Low
cufflinks 1.035        
cufflinks 0.334        

0 Strain