Gene : Glyma.11G171900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31342:SF9 - F10K1.18 PROTEIN Genomic Order:  1719
Name:  ? Glyma.11G171900 Secondary Identifier:  ? PAC:30529333
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G171900 0.5kb upstream 0.5kb upstream 3861 true Chr11: 18678033-18681893 Glycine max
Glyma.11G171900 0.5kb upstream 0.5kb upstream 500 false Chr11: 18678033-18678532 Glycine max
Glyma.11G171900 0.5kb downstream 0.5kb downstream 3861 true Chr11: 18678533-18682393 Glycine max
Glyma.11G171900 0.5kb downstream 0.5kb downstream 500 false Chr11: 18681894-18682393 Glycine max
Glyma.11G171900 1.0kb upstream 1.0kb upstream 4361 true Chr11: 18677533-18681893 Glycine max
Glyma.11G171900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18677533-18678532 Glycine max
Glyma.11G171900 1.0kb downstream 1.0kb downstream 4361 true Chr11: 18678533-18682893 Glycine max
Glyma.11G171900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18681894-18682893 Glycine max
Glyma.11G171900 2.0kb upstream 2.0kb upstream 5361 true Chr11: 18676533-18681893 Glycine max
Glyma.11G171900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18676533-18678532 Glycine max
Glyma.11G171900 2.0kb downstream 2.0kb downstream 5361 true Chr11: 18678533-18683893 Glycine max
Glyma.11G171900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18681894-18683893 Glycine max
Glyma.11G171900 5.0kb upstream 5.0kb upstream 8361 true Chr11: 18673533-18681893 Glycine max
Glyma.11G171900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18673533-18678532 Glycine max
Glyma.11G171900 5.0kb downstream 5.0kb downstream 8361 true Chr11: 18678533-18686893 Glycine max
Glyma.11G171900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18681894-18686893 Glycine max
Glyma.11G171900 10.0kb upstream 10.0kb upstream 13361 true Chr11: 18668533-18681893 Glycine max
Glyma.11G171900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18668533-18678532 Glycine max
Glyma.11G171900 10.0kb downstream 10.0kb downstream 13361 true Chr11: 18678533-18691893 Glycine max
Glyma.11G171900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18681894-18691893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310164 5265 Fabidae View MSA
124060870 5270 Rosid View MSA
123747177 5271 Pentapetalae View MSA
122796256 5272 Eudicot View MSA
122048437 5273 Angiosperm View MSA
121310973 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.425515 0.0 2.75662    
cufflinks 0.179588 0.0 0.892274 Low  
cufflinks 0.172878 0.0 0.667969 Low  
cufflinks 2.95361 0.0 12.109    
cufflinks 0.646638 0.0 3.80816    
cufflinks 0.021741 0.0 0.0971553 Low Low
cufflinks 0.571412 0.0 3.65336    
cufflinks 14.4399 0.0 50.003   High
cufflinks 3.53869 0.0 13.7839    
cufflinks 0.256       High
cufflinks 0.021     Low  
cufflinks 0.014     Low  
cufflinks 0.074     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082        
cufflinks 0.005     Low Low
cufflinks 0.298       High
cufflinks 0.097     Low  
cufflinks 0.153       High
cufflinks 0.008     Low Low
cufflinks 0.05     Low  
cufflinks 0.013     Low  
cufflinks 0.005     Low Low
cufflinks 0.018     Low  
cufflinks 0.02     Low  
cufflinks 0.044     Low  

0 Strain