Gene : Glyma.11G172100 G. max Wm82.a2.v1
Defline:  (1 of 63) PTHR23147:SF4 - SERINE/ARGININE-RICH SPLICING FACTOR 2 Genomic Order:  1721
Name:  ? Glyma.11G172100 Secondary Identifier:  ? PAC:30529305
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G172100 0.5kb upstream 0.5kb upstream 2946 true Chr11: 18698171-18701116 Glycine max
Glyma.11G172100 0.5kb upstream 0.5kb upstream 500 false Chr11: 18700617-18701116 Glycine max
Glyma.11G172100 0.5kb downstream 0.5kb downstream 2946 true Chr11: 18697671-18700616 Glycine max
Glyma.11G172100 0.5kb downstream 0.5kb downstream 500 false Chr11: 18697671-18698170 Glycine max
Glyma.11G172100 1.0kb upstream 1.0kb upstream 3446 true Chr11: 18698171-18701616 Glycine max
Glyma.11G172100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18700617-18701616 Glycine max
Glyma.11G172100 1.0kb downstream 1.0kb downstream 3446 true Chr11: 18697171-18700616 Glycine max
Glyma.11G172100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18697171-18698170 Glycine max
Glyma.11G172100 2.0kb upstream 2.0kb upstream 4446 true Chr11: 18698171-18702616 Glycine max
Glyma.11G172100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18700617-18702616 Glycine max
Glyma.11G172100 2.0kb downstream 2.0kb downstream 4446 true Chr11: 18696171-18700616 Glycine max
Glyma.11G172100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18696171-18698170 Glycine max
Glyma.11G172100 5.0kb upstream 5.0kb upstream 7446 true Chr11: 18698171-18705616 Glycine max
Glyma.11G172100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18700617-18705616 Glycine max
Glyma.11G172100 5.0kb downstream 5.0kb downstream 7446 true Chr11: 18693171-18700616 Glycine max
Glyma.11G172100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18693171-18698170 Glycine max
Glyma.11G172100 10.0kb upstream 10.0kb upstream 12446 true Chr11: 18698171-18710616 Glycine max
Glyma.11G172100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18700617-18710616 Glycine max
Glyma.11G172100 10.0kb downstream 10.0kb downstream 12446 true Chr11: 18688171-18700616 Glycine max
Glyma.11G172100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18688171-18698170 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782035 5273 Angiosperm View MSA
122296546 5265 Fabidae View MSA
124040128 5270 Rosid View MSA
123751645 5271 Pentapetalae View MSA
122774115 5272 Eudicot View MSA
121053578 5274 Embryophyte View MSA
123093595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0102039 0.0 0.0461475 Low  
cufflinks 0.0102147 0.0 0.0463241 Low  
cufflinks 0.00671585 0.0 0.0317743 Low Low
cufflinks 0.0168982 0.0 0.0731957 Low  
cufflinks 0.0422015 0.0 0.171438 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0268872 0.0 0.11227 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0206804 0.0 0.0881371 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain