Gene : Glyma.11G153900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12768 - BECLIN 1 Genomic Order:  1539
Name:  ? Glyma.11G153900 Secondary Identifier:  ? PAC:30530067
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G153900 0.5kb upstream 0.5kb upstream 7892 true Chr11: 12389260-12397151 Glycine max
Glyma.11G153900 0.5kb upstream 0.5kb upstream 500 false Chr11: 12396652-12397151 Glycine max
Glyma.11G153900 0.5kb downstream 0.5kb downstream 7892 true Chr11: 12388760-12396651 Glycine max
Glyma.11G153900 0.5kb downstream 0.5kb downstream 500 false Chr11: 12388760-12389259 Glycine max
Glyma.11G153900 1.0kb upstream 1.0kb upstream 8392 true Chr11: 12389260-12397651 Glycine max
Glyma.11G153900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12396652-12397651 Glycine max
Glyma.11G153900 1.0kb downstream 1.0kb downstream 8392 true Chr11: 12388260-12396651 Glycine max
Glyma.11G153900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12388260-12389259 Glycine max
Glyma.11G153900 2.0kb upstream 2.0kb upstream 9392 true Chr11: 12389260-12398651 Glycine max
Glyma.11G153900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12396652-12398651 Glycine max
Glyma.11G153900 2.0kb downstream 2.0kb downstream 9392 true Chr11: 12387260-12396651 Glycine max
Glyma.11G153900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12387260-12389259 Glycine max
Glyma.11G153900 5.0kb upstream 5.0kb upstream 12392 true Chr11: 12389260-12401651 Glycine max
Glyma.11G153900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12396652-12401651 Glycine max
Glyma.11G153900 5.0kb downstream 5.0kb downstream 12392 true Chr11: 12384260-12396651 Glycine max
Glyma.11G153900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12384260-12389259 Glycine max
Glyma.11G153900 10.0kb upstream 10.0kb upstream 17392 true Chr11: 12389260-12406651 Glycine max
Glyma.11G153900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12396652-12406651 Glycine max
Glyma.11G153900 10.0kb downstream 10.0kb downstream 17392 true Chr11: 12379260-12396651 Glycine max
Glyma.11G153900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12379260-12389259 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300464 5265 Fabidae View MSA
124064033 5270 Rosid View MSA
123737768 5271 Pentapetalae View MSA
122791932 5272 Eudicot View MSA
122047778 5273 Angiosperm View MSA
121344553 5274 Embryophyte View MSA
123428819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.43115 0.0 20.2011    
cufflinks 5.9123 0.0 16.3487   Low
cufflinks 10.9898 0.0 29.3957   High
cufflinks 7.67016 0.0 20.811    
cufflinks 6.19412 0.0 17.0467   Low
cufflinks 9.56209 0.0 25.6729    
cufflinks 8.52907 0.0 23.029    
cufflinks 9.44026 0.0 25.3615    
cufflinks 9.37316 0.0 25.1868    
cufflinks 1.593       Low
cufflinks 2.204        
cufflinks 3.148       High
cufflinks 1.958        
cufflinks 1.71       Low
cufflinks 2.629        
cufflinks 2.332        
cufflinks 1.375       Low
cufflinks 2.927       High
cufflinks 2.164        
cufflinks 2.499        
cufflinks 2.138        
cufflinks 2.483        
cufflinks 1.698       Low
cufflinks 2.729        
cufflinks 2.354        
cufflinks 2.292        

0 Strain