Gene : Glyma.11G155400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 Genomic Order:  1554
Name:  ? Glyma.11G155400 Secondary Identifier:  ? PAC:30530432
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G155400 0.5kb upstream 0.5kb upstream 6506 true Chr11: 12745777-12752282 Glycine max
Glyma.11G155400 0.5kb upstream 0.5kb upstream 500 false Chr11: 12745777-12746276 Glycine max
Glyma.11G155400 0.5kb downstream 0.5kb downstream 6506 true Chr11: 12746277-12752782 Glycine max
Glyma.11G155400 0.5kb downstream 0.5kb downstream 500 false Chr11: 12752283-12752782 Glycine max
Glyma.11G155400 1.0kb upstream 1.0kb upstream 7006 true Chr11: 12745277-12752282 Glycine max
Glyma.11G155400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12745277-12746276 Glycine max
Glyma.11G155400 1.0kb downstream 1.0kb downstream 7006 true Chr11: 12746277-12753282 Glycine max
Glyma.11G155400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12752283-12753282 Glycine max
Glyma.11G155400 2.0kb upstream 2.0kb upstream 8006 true Chr11: 12744277-12752282 Glycine max
Glyma.11G155400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12744277-12746276 Glycine max
Glyma.11G155400 2.0kb downstream 2.0kb downstream 8006 true Chr11: 12746277-12754282 Glycine max
Glyma.11G155400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12752283-12754282 Glycine max
Glyma.11G155400 5.0kb upstream 5.0kb upstream 11006 true Chr11: 12741277-12752282 Glycine max
Glyma.11G155400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12741277-12746276 Glycine max
Glyma.11G155400 5.0kb downstream 5.0kb downstream 11006 true Chr11: 12746277-12757282 Glycine max
Glyma.11G155400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12752283-12757282 Glycine max
Glyma.11G155400 10.0kb upstream 10.0kb upstream 16006 true Chr11: 12736277-12752282 Glycine max
Glyma.11G155400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12736277-12746276 Glycine max
Glyma.11G155400 10.0kb downstream 10.0kb downstream 16006 true Chr11: 12746277-12762282 Glycine max
Glyma.11G155400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12752283-12762282 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302591 5265 Fabidae View MSA
124069167 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.887605 0.0 5.04231    
cufflinks 1.71383 0.0 8.65946   High
cufflinks 0.785375 0.0 4.55021    
cufflinks 1.54681 0.0 7.93071   High
cufflinks 0.878401 0.0 5.00559    
cufflinks 0.388546 0.0 2.63206   Low
cufflinks 0.624037 0.0 3.86299    
cufflinks 0.587893 0.0 3.54867    
cufflinks 0.825664 0.0 4.72568    
cufflinks 0.046     Low Low
cufflinks 0.533        
cufflinks 0.305        
cufflinks 0.064     Low Low
cufflinks 0.123        
cufflinks 0.182        
cufflinks 0.656       High
cufflinks 0.048     Low Low
cufflinks 0.308        
cufflinks 0.594        
cufflinks 0.831       High
cufflinks 0.157        
cufflinks 0.444        
cufflinks 0.198        
cufflinks 0.271        
cufflinks 0.79       High
cufflinks 0.158        

0 Strain