Gene : Glyma.11G157100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1571
Name:  ? Glyma.11G157100 Secondary Identifier:  ? PAC:30528866
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G157100 0.5kb upstream 0.5kb upstream 1306 true Chr11: 13890856-13892161 Glycine max
Glyma.11G157100 0.5kb upstream 0.5kb upstream 500 false Chr11: 13890856-13891355 Glycine max
Glyma.11G157100 0.5kb downstream 0.5kb downstream 1306 true Chr11: 13891356-13892661 Glycine max
Glyma.11G157100 0.5kb downstream 0.5kb downstream 500 false Chr11: 13892162-13892661 Glycine max
Glyma.11G157100 1.0kb upstream 1.0kb upstream 1806 true Chr11: 13890356-13892161 Glycine max
Glyma.11G157100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13890356-13891355 Glycine max
Glyma.11G157100 1.0kb downstream 1.0kb downstream 1806 true Chr11: 13891356-13893161 Glycine max
Glyma.11G157100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13892162-13893161 Glycine max
Glyma.11G157100 2.0kb upstream 2.0kb upstream 2806 true Chr11: 13889356-13892161 Glycine max
Glyma.11G157100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13889356-13891355 Glycine max
Glyma.11G157100 2.0kb downstream 2.0kb downstream 2806 true Chr11: 13891356-13894161 Glycine max
Glyma.11G157100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13892162-13894161 Glycine max
Glyma.11G157100 5.0kb upstream 5.0kb upstream 5806 true Chr11: 13886356-13892161 Glycine max
Glyma.11G157100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13886356-13891355 Glycine max
Glyma.11G157100 5.0kb downstream 5.0kb downstream 5806 true Chr11: 13891356-13897161 Glycine max
Glyma.11G157100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13892162-13897161 Glycine max
Glyma.11G157100 10.0kb upstream 10.0kb upstream 10806 true Chr11: 13881356-13892161 Glycine max
Glyma.11G157100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13881356-13891355 Glycine max
Glyma.11G157100 10.0kb downstream 10.0kb downstream 10806 true Chr11: 13891356-13902161 Glycine max
Glyma.11G157100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13892162-13902161 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253799 5265 Fabidae View MSA
123996246 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9507 0.0 32.5966   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.685674 0.0 2.60977    
cufflinks 0.035134 0.0 0.157654 Low Low
cufflinks 1.7354 0.0 6.32464    
cufflinks 1.90076 0.0 6.88752    
cufflinks 0.0289673 0.0 0.132676 Low Low
cufflinks 0.289252 0.0 1.14165    
cufflinks 0.441271 0.0 1.71442    
cufflinks 14.258     High  
cufflinks 162.175     High High
cufflinks 13.938     High  
cufflinks 6.926        
cufflinks 0.482        
cufflinks 52.065     High  
cufflinks 1.113        
cufflinks 541.115     High High
cufflinks 5.783        
cufflinks 0.075     Low Low
cufflinks 0.173       Low
cufflinks 40.187     High  
cufflinks 0.646        
cufflinks 0.77        
cufflinks 95.655     High High
cufflinks 0.042     Low Low
cufflinks 73.439     High  

0 Strain