Gene : Glyma.11G157200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1572
Name:  ? Glyma.11G157200 Secondary Identifier:  ? PAC:30528408
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G157200 0.5kb upstream 0.5kb upstream 1316 true Chr11: 13897968-13899283 Glycine max
Glyma.11G157200 0.5kb upstream 0.5kb upstream 500 false Chr11: 13897968-13898467 Glycine max
Glyma.11G157200 0.5kb downstream 0.5kb downstream 1316 true Chr11: 13898468-13899783 Glycine max
Glyma.11G157200 0.5kb downstream 0.5kb downstream 500 false Chr11: 13899284-13899783 Glycine max
Glyma.11G157200 1.0kb upstream 1.0kb upstream 1816 true Chr11: 13897468-13899283 Glycine max
Glyma.11G157200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13897468-13898467 Glycine max
Glyma.11G157200 1.0kb downstream 1.0kb downstream 1816 true Chr11: 13898468-13900283 Glycine max
Glyma.11G157200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13899284-13900283 Glycine max
Glyma.11G157200 2.0kb upstream 2.0kb upstream 2816 true Chr11: 13896468-13899283 Glycine max
Glyma.11G157200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13896468-13898467 Glycine max
Glyma.11G157200 2.0kb downstream 2.0kb downstream 2816 true Chr11: 13898468-13901283 Glycine max
Glyma.11G157200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13899284-13901283 Glycine max
Glyma.11G157200 5.0kb upstream 5.0kb upstream 5816 true Chr11: 13893468-13899283 Glycine max
Glyma.11G157200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13893468-13898467 Glycine max
Glyma.11G157200 5.0kb downstream 5.0kb downstream 5816 true Chr11: 13898468-13904283 Glycine max
Glyma.11G157200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13899284-13904283 Glycine max
Glyma.11G157200 10.0kb upstream 10.0kb upstream 10816 true Chr11: 13888468-13899283 Glycine max
Glyma.11G157200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13888468-13898467 Glycine max
Glyma.11G157200 10.0kb downstream 10.0kb downstream 10816 true Chr11: 13898468-13909283 Glycine max
Glyma.11G157200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13899284-13909283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253799 5265 Fabidae View MSA
123996246 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.33828 0.0 20.234   High
cufflinks 0.0301233 0.0 0.13661 Low  
cufflinks 0.165692 0.0 0.664895 Low  
cufflinks 0.0494998 0.0 0.214412 Low  
cufflinks 0.250429 0.0 0.992375    
cufflinks 1.63937 0.0 5.97378   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00168723 0.0 0.0157078 Low Low
cufflinks 0.046296 0.0 0.202047 Low  
cufflinks 3.973        
cufflinks 97.738     High High
cufflinks 2.217        
cufflinks 1.713        
cufflinks 0.359        
cufflinks 11.22     High  
cufflinks 0.5        
cufflinks 139.77     High High
cufflinks 1.646        
cufflinks 0.074     Low Low
cufflinks 0.146       Low
cufflinks 24.724     High  
cufflinks 0.479        
cufflinks 0.262        
cufflinks 67.631     High High
cufflinks 0.086     Low Low
cufflinks 47.424     High High

0 Strain