Gene : Glyma.11G160000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  1600
Name:  ? Glyma.11G160000 Secondary Identifier:  ? PAC:30530127
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G160000 0.5kb upstream 0.5kb upstream 3149 true Chr11: 14640914-14644062 Glycine max
Glyma.11G160000 0.5kb upstream 0.5kb upstream 500 false Chr11: 14643563-14644062 Glycine max
Glyma.11G160000 0.5kb downstream 0.5kb downstream 3149 true Chr11: 14640414-14643562 Glycine max
Glyma.11G160000 0.5kb downstream 0.5kb downstream 500 false Chr11: 14640414-14640913 Glycine max
Glyma.11G160000 1.0kb upstream 1.0kb upstream 3649 true Chr11: 14640914-14644562 Glycine max
Glyma.11G160000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14643563-14644562 Glycine max
Glyma.11G160000 1.0kb downstream 1.0kb downstream 3649 true Chr11: 14639914-14643562 Glycine max
Glyma.11G160000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14639914-14640913 Glycine max
Glyma.11G160000 2.0kb upstream 2.0kb upstream 4649 true Chr11: 14640914-14645562 Glycine max
Glyma.11G160000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14643563-14645562 Glycine max
Glyma.11G160000 2.0kb downstream 2.0kb downstream 4649 true Chr11: 14638914-14643562 Glycine max
Glyma.11G160000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14638914-14640913 Glycine max
Glyma.11G160000 5.0kb upstream 5.0kb upstream 7649 true Chr11: 14640914-14648562 Glycine max
Glyma.11G160000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14643563-14648562 Glycine max
Glyma.11G160000 5.0kb downstream 5.0kb downstream 7649 true Chr11: 14635914-14643562 Glycine max
Glyma.11G160000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14635914-14640913 Glycine max
Glyma.11G160000 10.0kb upstream 10.0kb upstream 12649 true Chr11: 14640914-14653562 Glycine max
Glyma.11G160000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14643563-14653562 Glycine max
Glyma.11G160000 10.0kb downstream 10.0kb downstream 12649 true Chr11: 14630914-14643562 Glycine max
Glyma.11G160000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14630914-14640913 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310468 5265 Fabidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.61776 0.0 11.6623   Low
cufflinks 82.4826 0.0 234.048 High High
cufflinks 13.66 0.0 37.3697    
cufflinks 13.5537 0.0 37.1168    
cufflinks 19.2538 0.0 51.733    
cufflinks 38.2179 0.0 102.499 High  
cufflinks 1.6787 0.0 5.88979   Low
cufflinks 29.1421 0.0 77.756 High  
cufflinks 9.17939 0.0 26.0871    
cufflinks 74.968     High High
cufflinks 1.661       Low
cufflinks 9.739     High  
cufflinks 25.505     High  
cufflinks 17.829     High  
cufflinks 0.241       Low
cufflinks 26.681     High  
cufflinks 3.996        
cufflinks 39.349     High  
cufflinks 68.661     High High
cufflinks 11.089     High  
cufflinks 3.419        
cufflinks 16.14     High  
cufflinks 20.423     High  
cufflinks 1.524       Low
cufflinks 20.175     High  
cufflinks 7.54     High  

0 Strain