Gene : Glyma.11G160300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11851:SF123 - NARDILYSIN Genomic Order:  1603
Name:  ? Glyma.11G160300 Secondary Identifier:  ? PAC:30527981
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G160300 0.5kb upstream 0.5kb upstream 12245 true Chr11: 14666322-14678566 Glycine max
Glyma.11G160300 0.5kb upstream 0.5kb upstream 500 false Chr11: 14678067-14678566 Glycine max
Glyma.11G160300 0.5kb downstream 0.5kb downstream 12245 true Chr11: 14665822-14678066 Glycine max
Glyma.11G160300 0.5kb downstream 0.5kb downstream 500 false Chr11: 14665822-14666321 Glycine max
Glyma.11G160300 1.0kb upstream 1.0kb upstream 12745 true Chr11: 14666322-14679066 Glycine max
Glyma.11G160300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14678067-14679066 Glycine max
Glyma.11G160300 1.0kb downstream 1.0kb downstream 12745 true Chr11: 14665322-14678066 Glycine max
Glyma.11G160300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14665322-14666321 Glycine max
Glyma.11G160300 2.0kb upstream 2.0kb upstream 13745 true Chr11: 14666322-14680066 Glycine max
Glyma.11G160300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14678067-14680066 Glycine max
Glyma.11G160300 2.0kb downstream 2.0kb downstream 13745 true Chr11: 14664322-14678066 Glycine max
Glyma.11G160300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14664322-14666321 Glycine max
Glyma.11G160300 5.0kb upstream 5.0kb upstream 16745 true Chr11: 14666322-14683066 Glycine max
Glyma.11G160300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14678067-14683066 Glycine max
Glyma.11G160300 5.0kb downstream 5.0kb downstream 16745 true Chr11: 14661322-14678066 Glycine max
Glyma.11G160300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14661322-14666321 Glycine max
Glyma.11G160300 10.0kb upstream 10.0kb upstream 21745 true Chr11: 14666322-14688066 Glycine max
Glyma.11G160300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14678067-14688066 Glycine max
Glyma.11G160300 10.0kb downstream 10.0kb downstream 21745 true Chr11: 14656322-14678066 Glycine max
Glyma.11G160300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14656322-14666321 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300792 5265 Fabidae View MSA
124061492 5270 Rosid View MSA
123738387 5271 Pentapetalae View MSA
122790757 5272 Eudicot View MSA
122043199 5273 Angiosperm View MSA
121346552 5274 Embryophyte View MSA
123428383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.81137 0.0 20.8398    
cufflinks 6.46014 0.0 17.2596    
cufflinks 5.63808 0.0 15.1007    
cufflinks 6.70715 0.0 17.9076    
cufflinks 9.22721 0.0 24.6497   High
cufflinks 3.23171 0.0 8.95199   Low
cufflinks 6.44455 0.0 17.2308    
cufflinks 6.97118 0.0 18.6053    
cufflinks 5.62735 0.0 15.0858    
cufflinks 3.726        
cufflinks 1.205       Low
cufflinks 3.074        
cufflinks 4.626        
cufflinks 5.639       High
cufflinks 1.94        
cufflinks 3.677        
cufflinks 1.617       Low
cufflinks 3.557        
cufflinks 4.323        
cufflinks 4.009        
cufflinks 1.543       Low
cufflinks 3.991        
cufflinks 3.334        
cufflinks 1.191       Low
cufflinks 4.096        
cufflinks 2.292        

0 Strain