Gene : Glyma.11G160400 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3423 - Transcription initiation factor TFIID, subunit TAF10 (also component of histone acetyltransferase SAGA) Genomic Order:  1604
Name:  ? Glyma.11G160400 Secondary Identifier:  ? PAC:30531576
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G160400 0.5kb upstream 0.5kb upstream 6920 true Chr11: 14697606-14704525 Glycine max
Glyma.11G160400 0.5kb upstream 0.5kb upstream 500 false Chr11: 14697606-14698105 Glycine max
Glyma.11G160400 0.5kb downstream 0.5kb downstream 6920 true Chr11: 14698106-14705025 Glycine max
Glyma.11G160400 0.5kb downstream 0.5kb downstream 500 false Chr11: 14704526-14705025 Glycine max
Glyma.11G160400 1.0kb upstream 1.0kb upstream 7420 true Chr11: 14697106-14704525 Glycine max
Glyma.11G160400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14697106-14698105 Glycine max
Glyma.11G160400 1.0kb downstream 1.0kb downstream 7420 true Chr11: 14698106-14705525 Glycine max
Glyma.11G160400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14704526-14705525 Glycine max
Glyma.11G160400 2.0kb upstream 2.0kb upstream 8420 true Chr11: 14696106-14704525 Glycine max
Glyma.11G160400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14696106-14698105 Glycine max
Glyma.11G160400 2.0kb downstream 2.0kb downstream 8420 true Chr11: 14698106-14706525 Glycine max
Glyma.11G160400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14704526-14706525 Glycine max
Glyma.11G160400 5.0kb upstream 5.0kb upstream 11420 true Chr11: 14693106-14704525 Glycine max
Glyma.11G160400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14693106-14698105 Glycine max
Glyma.11G160400 5.0kb downstream 5.0kb downstream 11420 true Chr11: 14698106-14709525 Glycine max
Glyma.11G160400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14704526-14709525 Glycine max
Glyma.11G160400 10.0kb upstream 10.0kb upstream 16420 true Chr11: 14688106-14704525 Glycine max
Glyma.11G160400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14688106-14698105 Glycine max
Glyma.11G160400 10.0kb downstream 10.0kb downstream 16420 true Chr11: 14698106-14714525 Glycine max
Glyma.11G160400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14704526-14714525 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300885 5265 Fabidae View MSA
124061135 5270 Rosid View MSA
123740018 5271 Pentapetalae View MSA
122796575 5272 Eudicot View MSA
122043600 5273 Angiosperm View MSA
121344919 5274 Embryophyte View MSA
123424848 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.26272 0.0 34.5501   Low
cufflinks 13.1898 0.0 47.109    
cufflinks 8.14117 0.0 31.5068   Low
cufflinks 12.2758 0.0 43.0282    
cufflinks 10.7613 0.0 38.2514    
cufflinks 12.2885 0.0 42.2132    
cufflinks 11.8869 0.0 41.3805    
cufflinks 15.0762 0.0 49.2955   High
cufflinks 12.6981 0.0 43.2488    
cufflinks 0.372        
cufflinks 0.196       Low
cufflinks 0.573       High
cufflinks 0.452        
cufflinks 0.471        
cufflinks 0.242       Low
cufflinks 0.414        
cufflinks 0.215       Low
cufflinks 0.639       High
cufflinks 0.449        
cufflinks 0.406        
cufflinks 0.216       Low
cufflinks 0.462        
cufflinks 0.358        
cufflinks 0.292        
cufflinks 0.452        
cufflinks 0.354        

0 Strain