Gene : Glyma.11G161500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23315:SF7 - U-BOX DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  1615
Name:  ? Glyma.11G161500 Secondary Identifier:  ? PAC:30529195
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G161500 0.5kb upstream 0.5kb upstream 8163 true Chr11: 14887234-14895396 Glycine max
Glyma.11G161500 0.5kb upstream 0.5kb upstream 500 false Chr11: 14887234-14887733 Glycine max
Glyma.11G161500 0.5kb downstream 0.5kb downstream 8163 true Chr11: 14887734-14895896 Glycine max
Glyma.11G161500 0.5kb downstream 0.5kb downstream 500 false Chr11: 14895397-14895896 Glycine max
Glyma.11G161500 1.0kb upstream 1.0kb upstream 8663 true Chr11: 14886734-14895396 Glycine max
Glyma.11G161500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14886734-14887733 Glycine max
Glyma.11G161500 1.0kb downstream 1.0kb downstream 8663 true Chr11: 14887734-14896396 Glycine max
Glyma.11G161500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14895397-14896396 Glycine max
Glyma.11G161500 2.0kb upstream 2.0kb upstream 9663 true Chr11: 14885734-14895396 Glycine max
Glyma.11G161500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14885734-14887733 Glycine max
Glyma.11G161500 2.0kb downstream 2.0kb downstream 9663 true Chr11: 14887734-14897396 Glycine max
Glyma.11G161500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14895397-14897396 Glycine max
Glyma.11G161500 5.0kb upstream 5.0kb upstream 12663 true Chr11: 14882734-14895396 Glycine max
Glyma.11G161500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14882734-14887733 Glycine max
Glyma.11G161500 5.0kb downstream 5.0kb downstream 12663 true Chr11: 14887734-14900396 Glycine max
Glyma.11G161500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14895397-14900396 Glycine max
Glyma.11G161500 10.0kb upstream 10.0kb upstream 17663 true Chr11: 14877734-14895396 Glycine max
Glyma.11G161500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14877734-14887733 Glycine max
Glyma.11G161500 10.0kb downstream 10.0kb downstream 17663 true Chr11: 14887734-14905396 Glycine max
Glyma.11G161500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14895397-14905396 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308370 5265 Fabidae View MSA
124065009 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.41612 0.0 25.1384    
cufflinks 4.90934 0.0 13.2887   Low
cufflinks 15.4186 0.0 42.0536   High
cufflinks 6.37524 0.0 17.0658    
cufflinks 8.77498 0.0 23.4129    
cufflinks 18.317 0.0 50.5523   High
cufflinks 8.39915 0.0 22.4079    
cufflinks 6.7038 0.0 17.9234    
cufflinks 9.85359 0.0 26.3265    
cufflinks 2.761       Low
cufflinks 9.635     High High
cufflinks 5.977        
cufflinks 5.032        
cufflinks 4.364        
cufflinks 6.15     High  
cufflinks 3.269        
cufflinks 5.634        
cufflinks 3.677        
cufflinks 2.818       Low
cufflinks 3.866        
cufflinks 8.059     High High
cufflinks 3.661        
cufflinks 2.586       Low
cufflinks 10.194     High High
cufflinks 3.581        
cufflinks 7.707     High High

0 Strain