Gene : Glyma.11G146300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11661//PTHR11661:SF6 - 60S RIBOSOMAL PROTEIN L12 Genomic Order:  1463
Name:  ? Glyma.11G146300 Secondary Identifier:  ? PAC:30529297
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G146300 0.5kb upstream 0.5kb upstream 1544 true Chr11: 11287920-11289463 Glycine max
Glyma.11G146300 0.5kb upstream 0.5kb upstream 500 false Chr11: 11287920-11288419 Glycine max
Glyma.11G146300 0.5kb downstream 0.5kb downstream 1544 true Chr11: 11288420-11289963 Glycine max
Glyma.11G146300 0.5kb downstream 0.5kb downstream 500 false Chr11: 11289464-11289963 Glycine max
Glyma.11G146300 1.0kb upstream 1.0kb upstream 2044 true Chr11: 11287420-11289463 Glycine max
Glyma.11G146300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11287420-11288419 Glycine max
Glyma.11G146300 1.0kb downstream 1.0kb downstream 2044 true Chr11: 11288420-11290463 Glycine max
Glyma.11G146300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11289464-11290463 Glycine max
Glyma.11G146300 2.0kb upstream 2.0kb upstream 3044 true Chr11: 11286420-11289463 Glycine max
Glyma.11G146300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11286420-11288419 Glycine max
Glyma.11G146300 2.0kb downstream 2.0kb downstream 3044 true Chr11: 11288420-11291463 Glycine max
Glyma.11G146300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11289464-11291463 Glycine max
Glyma.11G146300 5.0kb upstream 5.0kb upstream 6044 true Chr11: 11283420-11289463 Glycine max
Glyma.11G146300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11283420-11288419 Glycine max
Glyma.11G146300 5.0kb downstream 5.0kb downstream 6044 true Chr11: 11288420-11294463 Glycine max
Glyma.11G146300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11289464-11294463 Glycine max
Glyma.11G146300 10.0kb upstream 10.0kb upstream 11044 true Chr11: 11278420-11289463 Glycine max
Glyma.11G146300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11278420-11288419 Glycine max
Glyma.11G146300 10.0kb downstream 10.0kb downstream 11044 true Chr11: 11288420-11299463 Glycine max
Glyma.11G146300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11289464-11299463 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299563 5265 Fabidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.9999 0.0 194.145 High  
cufflinks 112.573 0.0 322.389 High  
cufflinks 54.1571 0.0 145.465 High Low
cufflinks 81.6104 0.0 225.562 High  
cufflinks 185.839 0.0 578.809 High High
cufflinks 119.842 0.0 346.825 High  
cufflinks 145.705 0.0 433.59 High  
cufflinks 110.04 0.0 314.525 High  
cufflinks 99.8519 0.0 282.504 High  
cufflinks 64.439     High  
cufflinks 17.597     High Low
cufflinks 51.656     High  
cufflinks 163.021     High High
cufflinks 218.255     High High
cufflinks 16.662     High Low
cufflinks 53.597     High  
cufflinks 39.083     High  
cufflinks 47.281     High  
cufflinks 93.888     High  
cufflinks 32.77     High  
cufflinks 31.219     High  
cufflinks 38.558     High  
cufflinks 57.968     High  
cufflinks 25.692     High  
cufflinks 42.411     High  
cufflinks 46.117     High  

0 Strain