Gene : Glyma.11G147800 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1478
Name:  ? Glyma.11G147800 Secondary Identifier:  ? PAC:30531189
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G147800 0.5kb upstream 0.5kb upstream 2230 true Chr11: 11399546-11401775 Glycine max
Glyma.11G147800 0.5kb upstream 0.5kb upstream 500 false Chr11: 11401276-11401775 Glycine max
Glyma.11G147800 0.5kb downstream 0.5kb downstream 2230 true Chr11: 11399046-11401275 Glycine max
Glyma.11G147800 0.5kb downstream 0.5kb downstream 500 false Chr11: 11399046-11399545 Glycine max
Glyma.11G147800 1.0kb upstream 1.0kb upstream 2730 true Chr11: 11399546-11402275 Glycine max
Glyma.11G147800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11401276-11402275 Glycine max
Glyma.11G147800 1.0kb downstream 1.0kb downstream 2730 true Chr11: 11398546-11401275 Glycine max
Glyma.11G147800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11398546-11399545 Glycine max
Glyma.11G147800 2.0kb upstream 2.0kb upstream 3730 true Chr11: 11399546-11403275 Glycine max
Glyma.11G147800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11401276-11403275 Glycine max
Glyma.11G147800 2.0kb downstream 2.0kb downstream 3730 true Chr11: 11397546-11401275 Glycine max
Glyma.11G147800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11397546-11399545 Glycine max
Glyma.11G147800 5.0kb upstream 5.0kb upstream 6730 true Chr11: 11399546-11406275 Glycine max
Glyma.11G147800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11401276-11406275 Glycine max
Glyma.11G147800 5.0kb downstream 5.0kb downstream 6730 true Chr11: 11394546-11401275 Glycine max
Glyma.11G147800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11394546-11399545 Glycine max
Glyma.11G147800 10.0kb upstream 10.0kb upstream 11730 true Chr11: 11399546-11411275 Glycine max
Glyma.11G147800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11401276-11411275 Glycine max
Glyma.11G147800 10.0kb downstream 10.0kb downstream 11730 true Chr11: 11389546-11401275 Glycine max
Glyma.11G147800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11389546-11399545 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.662372 0.0 2.4438    
cufflinks 0.574548 0.0 2.13387    
cufflinks 1.11552 0.0 3.97782    
cufflinks 0.0919715 0.0 0.368226 Low  
cufflinks 6.57796 0.0 18.9713    
cufflinks 0.0291305 0.0 0.124839 Low Low
cufflinks 0.0136874 0.0 0.0626909 Low Low
cufflinks 44.9258 0.0 123.145 High High
cufflinks 5.94076 0.0 17.3156    
cufflinks 2.291        
cufflinks 0.765        
cufflinks 0.235        
cufflinks 0.082     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098     Low  
cufflinks 20.464     High High
cufflinks 0.076     Low  
cufflinks 0.18        
cufflinks 0.185        
cufflinks 2.576       High
cufflinks 0.088     Low  
cufflinks 0.052     Low Low
cufflinks 1.651        
cufflinks 0.133        
cufflinks 2.118        

0 Strain