Gene : Glyma.11G148100 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1481
Name:  ? Glyma.11G148100 Secondary Identifier:  ? PAC:30531487
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G148100 0.5kb upstream 0.5kb upstream 1281 true Chr11: 11441455-11442735 Glycine max
Glyma.11G148100 0.5kb upstream 0.5kb upstream 500 false Chr11: 11441455-11441954 Glycine max
Glyma.11G148100 0.5kb downstream 0.5kb downstream 1281 true Chr11: 11441955-11443235 Glycine max
Glyma.11G148100 0.5kb downstream 0.5kb downstream 500 false Chr11: 11442736-11443235 Glycine max
Glyma.11G148100 1.0kb upstream 1.0kb upstream 1781 true Chr11: 11440955-11442735 Glycine max
Glyma.11G148100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11440955-11441954 Glycine max
Glyma.11G148100 1.0kb downstream 1.0kb downstream 1781 true Chr11: 11441955-11443735 Glycine max
Glyma.11G148100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11442736-11443735 Glycine max
Glyma.11G148100 2.0kb upstream 2.0kb upstream 2781 true Chr11: 11439955-11442735 Glycine max
Glyma.11G148100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11439955-11441954 Glycine max
Glyma.11G148100 2.0kb downstream 2.0kb downstream 2781 true Chr11: 11441955-11444735 Glycine max
Glyma.11G148100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11442736-11444735 Glycine max
Glyma.11G148100 5.0kb upstream 5.0kb upstream 5781 true Chr11: 11436955-11442735 Glycine max
Glyma.11G148100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11436955-11441954 Glycine max
Glyma.11G148100 5.0kb downstream 5.0kb downstream 5781 true Chr11: 11441955-11447735 Glycine max
Glyma.11G148100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11442736-11447735 Glycine max
Glyma.11G148100 10.0kb upstream 10.0kb upstream 10781 true Chr11: 11431955-11442735 Glycine max
Glyma.11G148100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11431955-11441954 Glycine max
Glyma.11G148100 10.0kb downstream 10.0kb downstream 10781 true Chr11: 11441955-11452735 Glycine max
Glyma.11G148100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11442736-11452735 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314337 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.26151 0.0 20.2831    
cufflinks 50.1021 0.0 133.675 High  
cufflinks 3.71173 0.0 12.9109    
cufflinks 94.2642 0.0 256.827 High High
cufflinks 19.9404 0.0 55.2752 High  
cufflinks 2.33993 0.0 8.38639    
cufflinks 0.146078 0.0 0.592553 Low Low
cufflinks 121.797 0.0 339.421 High High
cufflinks 21.7131 0.0 59.9989 High  
cufflinks 31.559     High High
cufflinks 1.779        
cufflinks 2.368        
cufflinks 6.754        
cufflinks 0.81       Low
cufflinks 1.443       Low
cufflinks 11.785     High  
cufflinks 12.767     High  
cufflinks 2.736        
cufflinks 40.786     High High
cufflinks 2.802        
cufflinks 3.095        
cufflinks 4.419        
cufflinks 4.909        
cufflinks 2.062        
cufflinks 7.425     High  
cufflinks 2.876        

0 Strain