Gene : Glyma.11G148300 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1483
Name:  ? Glyma.11G148300 Secondary Identifier:  ? PAC:30529344
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G148300 0.5kb upstream 0.5kb upstream 1557 true Chr11: 11448886-11450442 Glycine max
Glyma.11G148300 0.5kb upstream 0.5kb upstream 500 false Chr11: 11448886-11449385 Glycine max
Glyma.11G148300 0.5kb downstream 0.5kb downstream 1557 true Chr11: 11449386-11450942 Glycine max
Glyma.11G148300 0.5kb downstream 0.5kb downstream 500 false Chr11: 11450443-11450942 Glycine max
Glyma.11G148300 1.0kb upstream 1.0kb upstream 2057 true Chr11: 11448386-11450442 Glycine max
Glyma.11G148300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11448386-11449385 Glycine max
Glyma.11G148300 1.0kb downstream 1.0kb downstream 2057 true Chr11: 11449386-11451442 Glycine max
Glyma.11G148300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11450443-11451442 Glycine max
Glyma.11G148300 2.0kb upstream 2.0kb upstream 3057 true Chr11: 11447386-11450442 Glycine max
Glyma.11G148300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11447386-11449385 Glycine max
Glyma.11G148300 2.0kb downstream 2.0kb downstream 3057 true Chr11: 11449386-11452442 Glycine max
Glyma.11G148300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11450443-11452442 Glycine max
Glyma.11G148300 5.0kb upstream 5.0kb upstream 6057 true Chr11: 11444386-11450442 Glycine max
Glyma.11G148300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11444386-11449385 Glycine max
Glyma.11G148300 5.0kb downstream 5.0kb downstream 6057 true Chr11: 11449386-11455442 Glycine max
Glyma.11G148300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11450443-11455442 Glycine max
Glyma.11G148300 10.0kb upstream 10.0kb upstream 11057 true Chr11: 11439386-11450442 Glycine max
Glyma.11G148300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11439386-11449385 Glycine max
Glyma.11G148300 10.0kb downstream 10.0kb downstream 11057 true Chr11: 11449386-11460442 Glycine max
Glyma.11G148300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11450443-11460442 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297718 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.192229 0.0 0.765156 Low  
cufflinks 0.0533403 0.0 0.227833 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.68844 0.0 6.08458    
cufflinks 0.676884 0.0 2.55784    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0237532 0.0 0.108795 Low Low
cufflinks 5.20363 0.0 16.6622   High
cufflinks 0.754016 0.0 2.83729    
cufflinks 0.737       High
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.748       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.152        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  

0 Strain